Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL133241.1-201ENST00000556832 487 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 HMGB1P33-201ENST00000563485 527 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.3□□□□□ -2.04
HDAC3O15379 AC098848.2-201ENST00000588023 330 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 RBM11P1-201ENST00000604951 799 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 AC017083.3-201ENST00000609955 700 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.3□□□□□ -2.04
HDAC3O15379 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.3□□□□□ -2.04
HDAC3O15379 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 MIR3688-2-201ENST00000636963 87 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.3□□□□□ -2.04
HDAC3O15379 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
HDAC3O15379 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.3□□□□□ -2.04
HDAC3O15379 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.29□□□□□ -2.04
HDAC3O15379 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RNY1P12-201ENST00000364251 105 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 Y_RNA.390-201ENST00000383932 102 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RNU6-641P-201ENST00000384006 107 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RNU6-483P-201ENST00000384088 108 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 MIR518C-201ENST00000384822 101 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RPS4XP8-201ENST00000402039 771 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 CIR1P3-201ENST00000405137 479 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HDAC3O15379 MTATP6P18-201ENST00000417994 673 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 USP9YP27-201ENST00000418455 438 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.29□□□□□ -2.04
HDAC3O15379 NDUFB4P7-201ENST00000423198 363 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RAC1P6-201ENST00000423911 575 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 AC137499.1-201ENST00000427602 88 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 MTND1P2-201ENST00000430604 821 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 ARL5AP4-201ENST00000430731 512 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 MTND2P24-201ENST00000453434 806 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.29□□□□□ -2.04
HDAC3O15379 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 SNORD97-201ENST00000459187 142 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RN7SL432P-201ENST00000484057 298 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC023194.1-201ENST00000493084 308 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC069439.1-201ENST00000494739 167 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 SNORA31.3-201ENST00000516029 96 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RNU2-10P-201ENST00000516375 211 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 Y_RNA.693-201ENST00000516641 110 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 RN7SKP258-201ENST00000517151 304 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 OR5AQ1P-201ENST00000527596 927 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 CYCSP26-201ENST00000534107 320 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AL512360.1-201ENST00000555346 234 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC234778.2-201ENST00000566241 354 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC3O15379 MIR3921-201ENST00000577308 85 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.29□□□□□ -2.04
HDAC3O15379 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.29□□□□□ -2.04
HDAC3O15379 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.29□□□□□ -2.04
HDAC3O15379 AC073534.2-201ENST00000620377 381 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 AC009161.2-201ENST00000624626 138 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.29□□□□□ -2.04
HDAC3O15379 MIR4275-201ENST00000636486 87 ntBASIC2.29□□□□□ -2.04
HDAC3O15379 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
HDAC3O15379 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
HDAC3O15379 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.28□□□□□ -2.04
HDAC3O15379 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
HDAC3O15379 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC3O15379 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC3O15379 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC3O15379 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC3O15379 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC3O15379 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC3O15379 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC3O15379 SNORA5B-201ENST00000363786 132 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC3O15379 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC3O15379 RNU6-946P-201ENST00000383878 107 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 SNORA24.1-201ENST00000384401 135 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 MIR34A-201ENST00000385130 110 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 RNU6-1158P-201ENST00000391167 107 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 RNU2-52P-201ENST00000410680 190 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 ZNF90P2-204ENST00000419323 1075 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC3O15379 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC3O15379 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC3O15379 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC3O15379 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC3O15379 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC3O15379 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC3O15379 snoU13.28-201ENST00000459235 104 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 RPS20P20-201ENST00000460498 340 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 MRPS17P3-201ENST00000465453 385 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.28□□□□□ -2.04
HDAC3O15379 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 AC010493.1-201ENST00000513479 292 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC3O15379 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 CASP1P1-201ENST00000526345 212 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.28□□□□□ -2.04
HDAC3O15379 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms