Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 Y_RNA.496-201ENST00000384444 101 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 RNU6-306P-201ENST00000384617 107 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
KRT40Q6A162 RN7SKP111-201ENST00000410349 271 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 RNU6-1050P-201ENST00000410388 107 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC126124.2-201ENST00000413542 321 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AL356968.1-201ENST00000416622 474 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.91□□□□□ -1.78
KRT40Q6A162 AC010401.1-201ENST00000463867 348 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT40Q6A162 AL135752.1-201ENST00000479477 471 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT40Q6A162 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.91□□□□□ -1.78
KRT40Q6A162 AC092436.3-201ENST00000511788 257 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 RNU6-927P-201ENST00000516199 100 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 SNORA31.20-201ENST00000517111 133 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC107934.2-201ENST00000518653 310 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.91□□□□□ -1.78
KRT40Q6A162 AC005476.1-201ENST00000554427 397 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AL355836.1-201ENST00000555951 870 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC100830.2-201ENST00000581636 240 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC106900.2-201ENST00000604994 317 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC034102.8-201ENST00000615146 484 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 ATP5A1P2-202ENST00000616464 443 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC007485.1-201ENST00000616755 206 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC091925.1-201ENST00000623204 462 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT40Q6A162 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRT40Q6A162 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT40Q6A162 PWAR6-201ENST00000552334 4618 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 AC004944.1-201ENST00000517807 3059 ntBASIC3.91□□□□□ -1.78
KRT40Q6A162 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
KRT40Q6A162 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
KRT40Q6A162 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
KRT40Q6A162 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRT40Q6A162 RNU6-1059P-201ENST00000363752 98 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 MIR568-201ENST00000385036 95 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 SNORA75.6-201ENST00000391318 127 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 Y_RNA.605-201ENST00000410577 105 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 CYCSP33-201ENST00000414485 327 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 BX679664.1-201ENST00000434429 253 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 USP9YP7-201ENST00000436723 430 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 USP9YP32-201ENST00000452432 430 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 SNORD5.1-201ENST00000458800 75 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 RPL23AP67-201ENST00000465341 474 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 RPL7P5-201ENST00000471472 736 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.9□□□□□ -1.79
KRT40Q6A162 AC026801.1-201ENST00000497178 464 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 RPL7P47-201ENST00000497299 556 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.9□□□□□ -1.79
KRT40Q6A162 PHBP14-201ENST00000512887 367 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 RNU6-120P-201ENST00000516077 103 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 Y_RNA.708-201ENST00000516950 96 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRT40Q6A162 AC087854.1-201ENST00000519706 414 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AP004371.1-201ENST00000525240 214 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AC026371.1-201ENST00000551867 419 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 FAM60BP-201ENST00000578364 658 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 LARP7P3-201ENST00000579888 337 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AL451007.1-201ENST00000595491 289 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AC006557.5-201ENST00000603126 811 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AL121655.1-201ENST00000605811 308 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AL161423.1-201ENST00000613700 262 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
KRT40Q6A162 AC133104.2-201ENST00000615272 193 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 PLCE1P1-201ENST00000622094 305 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
KRT40Q6A162 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRT40Q6A162 AC066616.2-201ENST00000559334 1481 ntBASIC3.9□□□□□ -1.79
KRT40Q6A162 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.9□□□□□ -1.79
KRT40Q6A162 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.9□□□□□ -1.79
KRT40Q6A162 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.9□□□□□ -1.79
KRT40Q6A162 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.9□□□□□ -1.79
KRT40Q6A162 AL049641.1-201ENST00000441055 1948 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 AL079305.1-201ENST00000623159 3008 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
KRT40Q6A162 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRT40Q6A162 SNORD62.1-201ENST00000362541 86 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 RNU6-1309P-201ENST00000363305 108 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 RNU6-1032P-201ENST00000384100 107 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 RNU6-463P-201ENST00000384340 107 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 RNU2-3P-201ENST00000410144 191 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.89□□□□□ -1.79
KRT40Q6A162 AL592045.1-201ENST00000429867 352 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 USP9YP30-201ENST00000430729 455 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.89□□□□□ -1.79
KRT40Q6A162 IPO7P1-201ENST00000442031 636 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 RPS24P13-201ENST00000442520 397 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 RNU7-187P-201ENST00000458985 68 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 AC108860.1-201ENST00000484521 383 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 AL049874.1-201ENST00000489560 388 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.89□□□□□ -1.79
KRT40Q6A162 APOOP4-201ENST00000513530 597 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 RNA5SP384-201ENST00000516615 116 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRT40Q6A162 LRRC37A5P-203ENST00000580181 585 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 AC011494.1-201ENST00000596454 237 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 ELOCP5-201ENST00000604924 333 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms