Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV13-1A0A0B4J241 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV13-1A0A0B4J241 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV13-1A0A0B4J241 MTND5P9-201ENST00000503854 1755 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 MIR302D-201ENST00000362275 68 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-223P-201ENST00000362830 107 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 SNORA62.1-201ENST00000364287 154 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU4-91P-201ENST00000364778 135 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-546P-201ENST00000383991 107 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AL158050.1-201ENST00000416077 457 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 USP9YP26-201ENST00000421008 661 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AL591704.2-201ENST00000421658 181 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AC092648.1-201ENST00000425870 423 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 MTND4LP7-201ENST00000431728 294 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 MTCO3P45-201ENST00000443036 613 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 MTATP6P30-201ENST00000443540 664 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 GXYLT1P1-201ENST00000446657 490 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 DUXAP8-207ENST00000456786 622 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-775P-201ENST00000459318 96 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 SNORA59A-201ENST00000459326 152 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 snoU13.15-201ENST00000459407 104 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AL133373.1-201ENST00000497098 94 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 RPL23AP94-201ENST00000512518 302 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-551P-201ENST00000516661 103 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AC109329.1-201ENST00000518744 317 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 AC090115.3-201ENST00000553218 849 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 LINC00557-201ENST00000563184 1279 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 SNORA77B-201ENST00000578179 125 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 HSPE1P19-201ENST00000603327 295 ntBASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV13-1A0A0B4J241 TEX21P-201ENST00000447107 1476 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-97P-201ENST00000363387 104 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-343P-201ENST00000364709 104 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 SNORA70.7-201ENST00000384159 133 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-114P-201ENST00000384704 105 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 MTND5P25-201ENST00000430499 799 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 RPS29P28-201ENST00000446439 141 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC021382.1-201ENST00000483523 359 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC108729.1-201ENST00000487812 947 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC023194.1-201ENST00000493084 308 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC023632.1-201ENST00000518463 375 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC025811.1-201ENST00000604312 472 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AL355802.3-201ENST00000607571 545 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC098614.4-201ENST00000607601 462 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC096772.1-201ENST00000609146 564 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC004908.3-201ENST00000610248 625 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AL357080.1-201ENST00000617394 239 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AC010975.3-201ENST00000618727 978 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 U6.99-201ENST00000637524 83 ntBASIC0.8□□□□□ -2.28
TRAV13-1A0A0B4J241 AP000560.1-201ENST00000624150 1937 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-432P-201ENST00000384196 109 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-1274P-201ENST00000384557 107 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 MIR1267-201ENST00000408723 78 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU4-27P-201ENST00000410889 139 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RPL23AP36-201ENST00000413895 458 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 TPMTP2-201ENST00000414372 726 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 OR6C66P-201ENST00000414917 930 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 HMGB1P31-201ENST00000437242 427 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RPL39P29-201ENST00000447779 157 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RN7SKP210-201ENST00000459176 261 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 SNORD97-201ENST00000459187 142 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 snoU13.26-201ENST00000459452 105 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RPL37P6-201ENST00000460682 294 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AC117532.1-201ENST00000514638 323 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-390P-201ENST00000516259 103 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AC022616.8-201ENST00000533569 253 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 RAB11AP2-201ENST00000545905 639 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 MIR4421-201ENST00000578133 69 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 MIR4295-201ENST00000585286 85 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AP001542.2-201ENST00000593141 364 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AL158827.2-201ENST00000602494 330 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AC073413.2-201ENST00000604332 360 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AL512598.1-201ENST00000610158 273 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AL078604.3-201ENST00000615580 211 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AL691447.3-201ENST00000635020 330 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 AC097655.1-201ENST00000635075 318 ntBASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
TRAV13-1A0A0B4J241 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 RNA5SP327-201ENST00000362494 101 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 SNORD114-19-201ENST00000363072 75 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-512P-201ENST00000364438 103 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 SNORD1A-201ENST00000364968 72 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms