Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.95□□□□□ -1.62
PCDHB9Q9Y5E1 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB9Q9Y5E1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 SNORD56.1-201ENST00000362913 68 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 Y_RNA.262-201ENST00000364641 102 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 RNU1-140P-201ENST00000365040 165 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 RNU6-1027P-201ENST00000383998 107 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 RNU6-217P-201ENST00000384164 104 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 RN7SKP27-201ENST00000410684 333 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 ELOCP19-201ENST00000411919 318 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 AL049830.2-201ENST00000480072 201 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 AC073073.1-201ENST00000493920 463 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 CR383656.8-201ENST00000549046 145 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 AC019159.1-201ENST00000605094 187 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 AC022441.3-201ENST00000605737 136 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 AC005828.6-201ENST00000606610 232 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 MIR6134-201ENST00000617606 109 ntBASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB9Q9Y5E1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 Y_RNA.580-201ENST00000391004 95 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC074117.2-201ENST00000417130 397 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC104333.2-201ENST00000422630 192 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC009237.7-201ENST00000447357 229 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 HMGN2P21-201ENST00000447764 270 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC000111.2-201ENST00000448200 210 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC005042.3-201ENST00000453230 174 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC020593.1-201ENST00000507399 299 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 RNA5SP392-201ENST00000516905 112 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 MIR5692C2-201ENST00000577959 77 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 MIR4277-201ENST00000578298 84 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 MIR1254-2-201ENST00000579553 63 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AL109809.4-201ENST00000603520 2185 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AL357075.2-201ENST00000614906 189 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 MTND1P7-201ENST00000632801 297 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 MFSD8-216ENST00000641147 4009 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 MAPK10-349ENST00000641767 3661 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC018529.3-201ENST00000624212 2254 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 SRP72P2-201ENST00000344851 1979 ntBASIC4.93□□□□□ -1.62
PCDHB9Q9Y5E1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNA5SP191-201ENST00000362585 102 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNU6-1141P-201ENST00000364520 107 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNU1-100P-201ENST00000365255 165 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AC068538.1-201ENST00000376856 336 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNU1-73P-201ENST00000383971 164 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 MIR23A-201ENST00000385245 73 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNU6-1197P-201ENST00000391183 107 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RN7SKP61-201ENST00000410642 295 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNU5E-9P-201ENST00000411164 104 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AL512844.2-201ENST00000433990 593 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 GPM6BP3-201ENST00000442797 145 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RN7SL517P-201ENST00000462240 305 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RPS4XP22-201ENST00000480755 780 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RPL30P5-201ENST00000494923 336 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AC016632.1-201ENST00000503994 196 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 ENPP7P9-201ENST00000514456 627 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNU6-1282P-201ENST00000516735 96 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RNU6-1073P-201ENST00000517182 106 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 RPL23AP53-201ENST00000521854 457 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 HSPE1P4-201ENST00000550617 308 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 AL022401.1-201ENST00000619498 108 ntBASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB9Q9Y5E1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms