Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.97□□□□□ -1.77
KRT40Q6A162 RBMY2UP-201ENST00000453474 324 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.97□□□□□ -1.77
KRT40Q6A162 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.97□□□□□ -1.77
KRT40Q6A162 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
KRT40Q6A162 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRT40Q6A162 AC026782.1-201ENST00000512952 449 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 SNORA70.14-201ENST00000516205 110 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 RNU6-840P-201ENST00000517275 65 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.97□□□□□ -1.77
KRT40Q6A162 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.97□□□□□ -1.77
KRT40Q6A162 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.97□□□□□ -1.77
KRT40Q6A162 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.97□□□□□ -1.77
KRT40Q6A162 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.97□□□□□ -1.77
KRT40Q6A162 MIR6128-201ENST00000615528 109 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 MIR7112-201ENST00000616126 65 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KRT40Q6A162 MTND4P1-201ENST00000457501 1466 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRT40Q6A162 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRT40Q6A162 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRT40Q6A162 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.96□□□□□ -1.77
KRT40Q6A162 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRT40Q6A162 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.96□□□□□ -1.77
KRT40Q6A162 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRT40Q6A162 AC058791.1-201ENST00000608412 3198 ntBASIC3.96□□□□□ -1.77
KRT40Q6A162 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRT40Q6A162 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.96□□□□□ -1.78
KRT40Q6A162 Y_RNA.133-201ENST00000363428 110 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 Y_RNA.144-201ENST00000363521 113 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 Y_RNA.404-201ENST00000383978 102 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 RNU6-1074P-201ENST00000383995 104 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 RNU6-639P-201ENST00000384074 107 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 RNU6-890P-201ENST00000384121 107 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 RNU6-45P-201ENST00000384471 107 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 Y_RNA.534-201ENST00000384599 112 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 MIR184-201ENST00000384962 84 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 SNORD17-201ENST00000390930 237 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT40Q6A162 RPS12P24-201ENST00000412619 387 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.96□□□□□ -1.78
KRT40Q6A162 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT40Q6A162 MTCO1P39-201ENST00000426148 480 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT40Q6A162 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AL360271.2-201ENST00000447710 161 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 RPL21P41-201ENST00000459863 264 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AC116337.1-201ENST00000509680 687 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 Y_RNA.670-201ENST00000516255 105 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT40Q6A162 RNU6-323P-201ENST00000521915 107 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT40Q6A162 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.96□□□□□ -1.78
KRT40Q6A162 AC002044.1-201ENST00000606707 158 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRT40Q6A162 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AC010378.1-201ENST00000619270 362 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AC006386.2-201ENST00000624491 75 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 AC012005.1-201ENST00000624575 75 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 MIR4275-201ENST00000636486 87 ntBASIC3.96□□□□□ -1.78
KRT40Q6A162 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.96□□□□□ -1.78
KRT40Q6A162 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRT40Q6A162 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
KRT40Q6A162 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRT40Q6A162 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.96□□□□□ -1.78
KRT40Q6A162 MTND5P30-201ENST00000452896 1731 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RNU4-35P-201ENST00000362588 141 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RNU6-593P-201ENST00000364716 112 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 AP002088.1-201ENST00000382740 395 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RNU6-1040P-201ENST00000383974 107 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RNU6-128P-201ENST00000383976 107 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 Y_RNA.459-201ENST00000384251 102 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RNU6-328P-201ENST00000390887 106 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.95□□□□□ -1.78
KRT40Q6A162 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.95□□□□□ -1.78
KRT40Q6A162 Z99755.1-201ENST00000414048 380 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 AC018865.2-201ENST00000423631 129 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 AL358176.2-201ENST00000425769 204 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RPL23AP69-201ENST00000431134 458 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 HIGD1AP11-201ENST00000438361 280 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.95□□□□□ -1.78
KRT40Q6A162 AC008264.1-201ENST00000447612 367 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.95□□□□□ -1.78
KRT40Q6A162 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.95□□□□□ -1.78
KRT40Q6A162 AC104136.1-201ENST00000512969 394 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RNA5SP309-201ENST00000516670 106 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RNU6-914P-201ENST00000516749 109 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RN7SKP295-201ENST00000517264 153 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.95□□□□□ -1.78
KRT40Q6A162 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.95□□□□□ -1.78
KRT40Q6A162 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.95□□□□□ -1.78
KRT40Q6A162 AC010653.1-201ENST00000571108 881 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.95□□□□□ -1.78
KRT40Q6A162 RNA5SP108-201ENST00000605921 117 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 RMST_8.1-201ENST00000610287 165 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 MIR7851-201ENST00000610611 160 ntBASIC3.95□□□□□ -1.78
KRT40Q6A162 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.95□□□□□ -1.78
KRT40Q6A162 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRT40Q6A162 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms