Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNA5SP397-201ENST00000391323 118 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 U3.39-201ENST00000408569 239 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 RPS12P10-201ENST00000427031 377 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 AL356867.1-201ENST00000429623 299 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 NUTF2P3-201ENST00000448540 384 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.61□□□□□ -1.67
NFKB1P19838 AC087477.1-201ENST00000465747 340 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 RPL30P1-201ENST00000488676 339 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.61□□□□□ -1.67
NFKB1P19838 SNORA31.20-201ENST00000517111 133 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 IGKV1-32-201ENST00000519290 311 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.61□□□□□ -1.67
NFKB1P19838 AP004371.1-201ENST00000525240 214 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 MIR4700-201ENST00000578311 74 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 RN7SL690P-201ENST00000582087 240 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 AC090132.2-201ENST00000615881 347 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NFKB1P19838 AC091905.2-201ENST00000623143 306 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.61□□□□□ -1.67
NFKB1P19838 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
NFKB1P19838 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.61□□□□□ -1.67
NFKB1P19838 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 AC004925.1-201ENST00000624256 2706 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.6□□□□□ -1.67
NFKB1P19838 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NFKB1P19838 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 A2MP1-204ENST00000566278 4130 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.6□□□□□ -1.67
NFKB1P19838 CPHL1P-201ENST00000461341 3407 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.6□□□□□ -1.67
NFKB1P19838 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 RNU6-741P-201ENST00000383889 107 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 RNU6-1117P-201ENST00000384525 104 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 UBA52P6-201ENST00000399822 382 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 RNU2-68P-201ENST00000410878 191 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 RN7SKP167-201ENST00000411047 285 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 EIF1AXP1-201ENST00000419267 435 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.6□□□□□ -1.67
NFKB1P19838 AC007395.1-201ENST00000451333 677 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 SNORD2.1-201ENST00000458762 69 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 AP001781.1-201ENST00000530977 207 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.6□□□□□ -1.67
NFKB1P19838 RPL7P50-201ENST00000600588 727 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 AC108706.1-201ENST00000611053 297 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 AC100827.5-201ENST00000615883 426 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.6□□□□□ -1.67
NFKB1P19838 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.6□□□□□ -1.67
NFKB1P19838 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.6□□□□□ -1.67
NFKB1P19838 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.6□□□□□ -1.67
NFKB1P19838 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NFKB1P19838 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.59□□□□□ -1.67
NFKB1P19838 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NFKB1P19838 MAPK10-304ENST00000641341 3984 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 MIR410-201ENST00000362222 80 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RNU6-923P-201ENST00000364753 107 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RNU6-1289P-201ENST00000384431 106 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 Y_RNA.570-201ENST00000384750 101 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 MIR1290-201ENST00000408735 78 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RNU6-1135P-201ENST00000411083 103 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RPL27AP8-201ENST00000424277 446 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 AC006466.1-201ENST00000438721 289 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 AC096638.1-201ENST00000444678 216 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.59□□□□□ -1.67
NFKB1P19838 RN7SL354P-201ENST00000469282 294 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 AC117440.1-201ENST00000474107 571 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 AP001025.1-201ENST00000486139 332 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 AF186996.7-201ENST00000492781 209 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RPL23AP49-201ENST00000492925 468 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 SNORA27.4-201ENST00000516650 95 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RN7SKP49-201ENST00000516675 260 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.59□□□□□ -1.67
NFKB1P19838 MED28P6-201ENST00000558776 231 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.59□□□□□ -1.67
NFKB1P19838 BPIFA4P-203ENST00000603168 689 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 RNA5SP108-201ENST00000605921 117 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 AC241585.2-209ENST00000638217 143 ntBASIC4.59□□□□□ -1.67
NFKB1P19838 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NFKB1P19838 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NFKB1P19838 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.59□□□□□ -1.68
NFKB1P19838 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.68
NFKB1P19838 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
NFKB1P19838 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.58□□□□□ -1.68
NFKB1P19838 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NFKB1P19838 AC125257.1-201ENST00000560400 2930 ntBASIC4.58□□□□□ -1.68
NFKB1P19838 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms