Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 AC073539.2-201ENST00000597113 165 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 SNRPGP17-201ENST00000603780 214 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.72□□□□□ -1.81
PNKPQ96T60 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.72□□□□□ -1.81
PNKPQ96T60 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.72□□□□□ -1.81
PNKPQ96T60 AC010733.2-201ENST00000589496 5702 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.72□□□□□ -1.81
PNKPQ96T60 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PNKPQ96T60 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
PNKPQ96T60 AL136964.1-201ENST00000622038 2990 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RNU6-1188P-201ENST00000363795 107 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RNU6-512P-201ENST00000364438 103 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 Y_RNA.482-201ENST00000384377 111 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RNU6-601P-201ENST00000384540 107 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 MIR578-201ENST00000384828 96 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 MIR490-201ENST00000384865 128 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AL360182.1-201ENST00000397433 468 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RN7SKP177-201ENST00000410567 355 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RPL7P37-201ENST00000425095 738 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 Z82205.1-201ENST00000428456 297 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AL592045.1-201ENST00000429867 352 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AC097713.2-201ENST00000430199 356 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.82
PNKPQ96T60 AL357552.1-201ENST00000445254 415 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AC008264.1-201ENST00000447612 367 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RPS24P6-201ENST00000452670 400 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.71□□□□□ -1.82
PNKPQ96T60 HMGN1P18-201ENST00000457642 277 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 Y_RNA.631-201ENST00000459607 101 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RPL37P6-201ENST00000460682 294 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 SUMO2P6-201ENST00000505273 288 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.71□□□□□ -1.82
PNKPQ96T60 SNORA70.14-201ENST00000516205 110 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RNU6-327P-201ENST00000516270 127 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 RNU6-1213P-201ENST00000517075 94 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 IGKV2-23-201ENST00000518729 323 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AC068657.1-201ENST00000520807 306 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AC007458.1-201ENST00000542812 373 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.71□□□□□ -1.82
PNKPQ96T60 AC002044.1-201ENST00000606707 158 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AL360181.4-201ENST00000621752 134 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 AC244517.12-201ENST00000623581 663 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 Z99571.1-201ENST00000636677 394 ntBASIC3.71□□□□□ -1.82
PNKPQ96T60 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.71□□□□□ -1.82
PNKPQ96T60 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PNKPQ96T60 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.71□□□□□ -1.82
PNKPQ96T60 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PNKPQ96T60 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PNKPQ96T60 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PNKPQ96T60 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PNKPQ96T60 DEFB108F-201ENST00000344638 222 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 MIR148B-201ENST00000362252 99 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 SNORD56.3-201ENST00000363507 71 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 Y_RNA.146-201ENST00000363549 102 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 Y_RNA.187-201ENST00000363918 113 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 RNA5SP267-201ENST00000364893 126 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 Y_RNA.445-201ENST00000384168 102 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC063979.1-201ENST00000415539 377 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.7□□□□□ -1.82
PNKPQ96T60 SNAP23P1-201ENST00000433229 246 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AL360271.2-201ENST00000447710 161 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 MTCO3P10-201ENST00000455912 772 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 RPL23AP31-201ENST00000456160 467 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 RPL30P15-201ENST00000457129 321 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PNKPQ96T60 MTND3P25-201ENST00000509243 135 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 PHBP14-201ENST00000512887 367 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 APOOP4-201ENST00000513530 597 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 SNORA64.4-201ENST00000516632 81 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.7□□□□□ -1.82
PNKPQ96T60 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 CYCSP27-201ENST00000527643 293 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.7□□□□□ -1.82
PNKPQ96T60 MIR5195-201ENST00000583555 115 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AC002545.1-201ENST00000592511 181 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.7□□□□□ -1.82
PNKPQ96T60 AC040896.1-201ENST00000613819 479 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 MIR6128-201ENST00000615528 109 ntBASIC3.7□□□□□ -1.82
PNKPQ96T60 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PNKPQ96T60 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PNKPQ96T60 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PNKPQ96T60 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 SDAD1P2-201ENST00000441308 2028 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms