Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4□□□□□ -1.77
KRT40Q6A162 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4□□□□□ -1.77
KRT40Q6A162 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4□□□□□ -1.77
KRT40Q6A162 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4□□□□□ -1.77
KRT40Q6A162 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRT40Q6A162 SMURF2P1-201ENST00000514992 481 ntBASIC4□□□□□ -1.77
KRT40Q6A162 RNU6-677P-201ENST00000516914 101 ntBASIC4□□□□□ -1.77
KRT40Q6A162 AL121603.1-201ENST00000553815 142 ntBASIC4□□□□□ -1.77
KRT40Q6A162 TGIF1P1-201ENST00000558095 802 ntBASIC4□□□□□ -1.77
KRT40Q6A162 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4□□□□□ -1.77
KRT40Q6A162 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4□□□□□ -1.77
KRT40Q6A162 MIR4425-201ENST00000580572 84 ntBASIC4□□□□□ -1.77
KRT40Q6A162 CYP2C61P-201ENST00000604072 290 ntBASIC4□□□□□ -1.77
KRT40Q6A162 AC110741.2-201ENST00000605278 268 ntBASIC4□□□□□ -1.77
KRT40Q6A162 AC022418.1-201ENST00000624118 445 ntBASIC4□□□□□ -1.77
KRT40Q6A162 AL669831.3-213ENST00000636676 183 ntBASIC4□□□□□ -1.77
KRT40Q6A162 KPNA2P1-201ENST00000458289 1591 ntBASIC4□□□□□ -1.77
KRT40Q6A162 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
KRT40Q6A162 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRT40Q6A162 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.99□□□□□ -1.77
KRT40Q6A162 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRT40Q6A162 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 AL365440.1-201ENST00000436135 2167 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 AL049781.1-201ENST00000623195 3585 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRT40Q6A162 Y_RNA.5-201ENST00000362334 102 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 RNU6-1115P-201ENST00000362490 106 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 Y_RNA.148-201ENST00000363557 117 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 Y_RNA.473-201ENST00000384333 102 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 RNU6-817P-201ENST00000391083 104 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 RPS12P23-201ENST00000419579 400 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.99□□□□□ -1.77
KRT40Q6A162 AL591704.1-201ENST00000432574 275 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.99□□□□□ -1.77
KRT40Q6A162 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.99□□□□□ -1.77
KRT40Q6A162 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.99□□□□□ -1.77
KRT40Q6A162 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.99□□□□□ -1.77
KRT40Q6A162 RPS4XP2-201ENST00000458402 793 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 MIR2053-201ENST00000459295 91 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 RN7SL807P-201ENST00000470923 297 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 AC025518.1-201ENST00000479856 347 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 PTP4A1P4-201ENST00000512479 322 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 MIR2276-201ENST00000516886 89 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.99□□□□□ -1.77
KRT40Q6A162 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 EIF4BP1-201ENST00000554881 351 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 MIR3941-201ENST00000582572 103 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 AC107294.1-201ENST00000609524 467 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 MTND5P10-201ENST00000603719 1809 ntBASIC3.99□□□□□ -1.77
KRT40Q6A162 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.99□□□□□ -1.77
KRT40Q6A162 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRT40Q6A162 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
KRT40Q6A162 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRT40Q6A162 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRT40Q6A162 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRT40Q6A162 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRT40Q6A162 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.98□□□□□ -1.77
KRT40Q6A162 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRT40Q6A162 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.98□□□□□ -1.77
KRT40Q6A162 AL513302.2-201ENST00000562313 1842 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.98□□□□□ -1.77
KRT40Q6A162 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KRT40Q6A162 Y_RNA.28-201ENST00000362554 111 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 RNU6-371P-201ENST00000364283 108 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.98□□□□□ -1.77
KRT40Q6A162 SNAP23P1-201ENST00000433229 246 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 AL591212.2-201ENST00000433923 257 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.98□□□□□ -1.77
KRT40Q6A162 AC021146.2-201ENST00000504736 556 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 RNU6-1332P-201ENST00000516666 104 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 RNU6-1016P-201ENST00000516689 94 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 IGKV2D-23-201ENST00000518179 286 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.98□□□□□ -1.77
KRT40Q6A162 NDUFB9P3-201ENST00000521269 501 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 ERHP1-201ENST00000523006 310 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
KRT40Q6A162 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.98□□□□□ -1.77
KRT40Q6A162 MIR5690-201ENST00000583739 73 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 AC073539.2-201ENST00000597113 165 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.98□□□□□ -1.77
KRT40Q6A162 AC012119.1-201ENST00000603184 222 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 AC007938.3-201ENST00000604965 623 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 MIR15A-201ENST00000607334 83 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 AL157817.1-201ENST00000614264 790 ntBASIC3.98□□□□□ -1.77
KRT40Q6A162 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KRT40Q6A162 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.97□□□□□ -1.77
KRT40Q6A162 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRT40Q6A162 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRT40Q6A162 U3.15-201ENST00000365398 212 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 RNU6-95P-201ENST00000384697 107 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 AL138878.1-201ENST00000405131 347 ntBASIC3.97□□□□□ -1.77
KRT40Q6A162 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.97□□□□□ -1.77
KRT40Q6A162 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms