Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.99□□□□□ -1.77
KLF4O43474 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.99□□□□□ -1.77
KLF4O43474 GNAI2P1-201ENST00000541815 315 ntBASIC3.99□□□□□ -1.77
KLF4O43474 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 AC025281.1-201ENST00000567026 265 ntBASIC3.99□□□□□ -1.77
KLF4O43474 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.99□□□□□ -1.77
KLF4O43474 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 AC024220.1-201ENST00000603675 484 ntBASIC3.99□□□□□ -1.77
KLF4O43474 AL591034.3-201ENST00000605511 685 ntBASIC3.99□□□□□ -1.77
KLF4O43474 MIR432-201ENST00000606207 94 ntBASIC3.99□□□□□ -1.77
KLF4O43474 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KLF4O43474 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KLF4O43474 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KLF4O43474 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
KLF4O43474 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
KLF4O43474 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 RNU6-595P-201ENST00000363944 107 ntBASIC3.98□□□□□ -1.77
KLF4O43474 RNA5SP509-201ENST00000364577 119 ntBASIC3.98□□□□□ -1.77
KLF4O43474 RNU6-142P-201ENST00000384019 107 ntBASIC3.98□□□□□ -1.77
KLF4O43474 MIR93-201ENST00000385024 80 ntBASIC3.98□□□□□ -1.77
KLF4O43474 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 MTCYBP2-201ENST00000407745 171 ntBASIC3.98□□□□□ -1.77
KLF4O43474 RNU6-1156P-201ENST00000410365 100 ntBASIC3.98□□□□□ -1.77
KLF4O43474 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.98□□□□□ -1.77
KLF4O43474 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.98□□□□□ -1.77
KLF4O43474 VWA8P1-201ENST00000510889 176 ntBASIC3.98□□□□□ -1.77
KLF4O43474 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 AC144568.1-201ENST00000520139 137 ntBASIC3.98□□□□□ -1.77
KLF4O43474 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.98□□□□□ -1.77
KLF4O43474 AP000889.1-201ENST00000530968 660 ntBASIC3.98□□□□□ -1.77
KLF4O43474 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.98□□□□□ -1.77
KLF4O43474 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.98□□□□□ -1.77
KLF4O43474 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 AC010653.1-201ENST00000571108 881 ntBASIC3.98□□□□□ -1.77
KLF4O43474 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.98□□□□□ -1.77
KLF4O43474 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.98□□□□□ -1.77
KLF4O43474 AC005014.2-201ENST00000607795 599 ntBASIC3.98□□□□□ -1.77
KLF4O43474 AC009318.2-201ENST00000610917 651 ntBASIC3.98□□□□□ -1.77
KLF4O43474 AC011944.2-201ENST00000624440 683 ntBASIC3.98□□□□□ -1.77
KLF4O43474 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
KLF4O43474 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.98□□□□□ -1.77
KLF4O43474 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KLF4O43474 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KLF4O43474 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
KLF4O43474 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
KLF4O43474 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.97□□□□□ -1.77
KLF4O43474 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.97□□□□□ -1.77
KLF4O43474 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KLF4O43474 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
KLF4O43474 Y_RNA.148-201ENST00000363557 117 ntBASIC3.97□□□□□ -1.77
KLF4O43474 Y_RNA.158-201ENST00000363651 101 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RNU6-99P-201ENST00000364721 107 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RNU6-487P-201ENST00000365430 104 ntBASIC3.97□□□□□ -1.77
KLF4O43474 MIR3065-201ENST00000390137 79 ntBASIC3.97□□□□□ -1.77
KLF4O43474 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
KLF4O43474 SNORD66.1-201ENST00000391230 76 ntBASIC3.97□□□□□ -1.77
KLF4O43474 MRPL42P3-201ENST00000401492 326 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RNA5SP390-201ENST00000410191 113 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RNA5SP36-201ENST00000410197 133 ntBASIC3.97□□□□□ -1.77
KLF4O43474 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.97□□□□□ -1.77
KLF4O43474 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.97□□□□□ -1.77
KLF4O43474 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.97□□□□□ -1.77
KLF4O43474 AC243964.1-201ENST00000441814 261 ntBASIC3.97□□□□□ -1.77
KLF4O43474 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.97□□□□□ -1.77
KLF4O43474 AC010618.1-201ENST00000469924 477 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RPL21P126-201ENST00000470049 478 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RPS26P21-201ENST00000475397 348 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RNU6-120P-201ENST00000516077 103 ntBASIC3.97□□□□□ -1.77
KLF4O43474 RNA5SP154-201ENST00000516193 111 ntBASIC3.97□□□□□ -1.77
KLF4O43474 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.97□□□□□ -1.77
KLF4O43474 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.97□□□□□ -1.77
KLF4O43474 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.97□□□□□ -1.77
KLF4O43474 AC092447.9-201ENST00000603395 144 ntBASIC3.97□□□□□ -1.77
KLF4O43474 AL162730.1-201ENST00000605734 292 ntBASIC3.97□□□□□ -1.77
KLF4O43474 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.97□□□□□ -1.77
KLF4O43474 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KLF4O43474 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.96□□□□□ -1.77
KLF4O43474 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
KLF4O43474 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KLF4O43474 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KLF4O43474 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KLF4O43474 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KLF4O43474 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KLF4O43474 RHOT1P2-201ENST00000366423 333 ntBASIC3.96□□□□□ -1.78
KLF4O43474 RNY1P14-201ENST00000384426 108 ntBASIC3.96□□□□□ -1.78
KLF4O43474 RNU6-748P-201ENST00000384648 107 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms