Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMEM50BP56557 FTLP6-201ENST00000355274 422 ntBASIC2.55□□□□□ -2
TMEM50BP56557 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
TMEM50BP56557 RNU2-29P-201ENST00000410423 189 ntBASIC2.55□□□□□ -2
TMEM50BP56557 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMEM50BP56557 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.55□□□□□ -2
TMEM50BP56557 AC016769.2-201ENST00000414815 475 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AC092047.1-201ENST00000424997 240 ntBASIC2.55□□□□□ -2
TMEM50BP56557 GPM6BP2-201ENST00000432046 144 ntBASIC2.55□□□□□ -2
TMEM50BP56557 Z82210.1-201ENST00000440037 231 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AL049641.1-201ENST00000441055 1948 ntBASIC2.55□□□□□ -2
TMEM50BP56557 GPM6BP1-201ENST00000446387 144 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AC104058.1-201ENST00000448028 297 ntBASIC2.55□□□□□ -2
TMEM50BP56557 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.55□□□□□ -2
TMEM50BP56557 MTND3P16-201ENST00000452205 344 ntBASIC2.55□□□□□ -2
TMEM50BP56557 SNRPFP3-201ENST00000457792 225 ntBASIC2.55□□□□□ -2
TMEM50BP56557 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.55□□□□□ -2
TMEM50BP56557 snoU13.28-201ENST00000459235 104 ntBASIC2.55□□□□□ -2
TMEM50BP56557 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.55□□□□□ -2
TMEM50BP56557 RN7SL293P-201ENST00000481765 281 ntBASIC2.55□□□□□ -2
TMEM50BP56557 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMEM50BP56557 RNA5SP165-201ENST00000517142 115 ntBASIC2.55□□□□□ -2
TMEM50BP56557 RNU1-45P-201ENST00000517191 141 ntBASIC2.55□□□□□ -2
TMEM50BP56557 ATP5F1P5-201ENST00000526403 760 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AC011611.1-201ENST00000552179 197 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AL118558.2-201ENST00000556294 238 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.55□□□□□ -2
TMEM50BP56557 AC008669.1-201ENST00000565823 2178 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AC006130.2-201ENST00000586202 326 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.55□□□□□ -2
TMEM50BP56557 AC004805.2-201ENST00000605382 482 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AL109618.2-201ENST00000605527 211 ntBASIC2.55□□□□□ -2
TMEM50BP56557 AC004852.3-201ENST00000614131 326 ntBASIC2.55□□□□□ -2
TMEM50BP56557 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.55□□□□□ -2
TMEM50BP56557 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMEM50BP56557 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.55□□□□□ -2
TMEM50BP56557 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMEM50BP56557 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM50BP56557 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM50BP56557 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM50BP56557 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM50BP56557 MTND4P35-201ENST00000604257 1375 ntBASIC2.54□□□□□ -2
TMEM50BP56557 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.54□□□□□ -2
TMEM50BP56557 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.54□□□□□ -2
TMEM50BP56557 SNORA75B-201ENST00000384053 137 ntBASIC2.54□□□□□ -2
TMEM50BP56557 RNU6-38P-201ENST00000384085 107 ntBASIC2.54□□□□□ -2
TMEM50BP56557 RNU6-140P-201ENST00000384566 108 ntBASIC2.54□□□□□ -2
TMEM50BP56557 Y_RNA.573-201ENST00000384763 105 ntBASIC2.54□□□□□ -2
TMEM50BP56557 MIR578-201ENST00000384828 96 ntBASIC2.54□□□□□ -2
TMEM50BP56557 RNA5SP354-201ENST00000391247 136 ntBASIC2.54□□□□□ -2
TMEM50BP56557 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM50BP56557 AL031121.1-201ENST00000406553 254 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AL606923.1-201ENST00000406616 190 ntBASIC2.54□□□□□ -2
TMEM50BP56557 RN7SKP123-201ENST00000410732 291 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AL451074.5-201ENST00000415894 435 ntBASIC2.54□□□□□ -2
TMEM50BP56557 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.54□□□□□ -2
TMEM50BP56557 AC097713.2-201ENST00000430199 356 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.54□□□□□ -2
TMEM50BP56557 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.54□□□□□ -2
TMEM50BP56557 SCARNA18-201ENST00000459004 134 ntBASIC2.54□□□□□ -2
TMEM50BP56557 RNU6-333P-201ENST00000459117 107 ntBASIC2.54□□□□□ -2
TMEM50BP56557 RN7SL863P-201ENST00000462370 296 ntBASIC2.54□□□□□ -2
TMEM50BP56557 RN7SL542P-201ENST00000467147 294 ntBASIC2.54□□□□□ -2
TMEM50BP56557 MTCYBP18-201ENST00000501056 747 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AC116353.2-201ENST00000505332 712 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.54□□□□□ -2
TMEM50BP56557 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.54□□□□□ -2
TMEM50BP56557 RNA5SP385-201ENST00000515947 110 ntBASIC2.54□□□□□ -2
TMEM50BP56557 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.54□□□□□ -2
TMEM50BP56557 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.54□□□□□ -2
TMEM50BP56557 BNIP3P6-201ENST00000549284 499 ntBASIC2.54□□□□□ -2
TMEM50BP56557 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.54□□□□□ -2
TMEM50BP56557 MIR4424-201ENST00000585257 86 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AC008739.2-201ENST00000597006 317 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AC107294.1-201ENST00000609524 467 ntBASIC2.54□□□□□ -2
TMEM50BP56557 DISC2.1-201ENST00000612827 205 ntBASIC2.54□□□□□ -2
TMEM50BP56557 AC099506.2-201ENST00000623074 221 ntBASIC2.54□□□□□ -2
TMEM50BP56557 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.54□□□□□ -2
TMEM50BP56557 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.54□□□□□ -2
TMEM50BP56557 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.54□□□□□ -2
TMEM50BP56557 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM50BP56557 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TMEM50BP56557 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.53□□□□□ -2
TMEM50BP56557 OR4G1P-203ENST00000641984 1631 ntBASIC2.53□□□□□ -2
TMEM50BP56557 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEM50BP56557 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEM50BP56557 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM50BP56557 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.53□□□□□ -2
TMEM50BP56557 RNU1-105P-201ENST00000363470 161 ntBASIC2.53□□□□□ -2
TMEM50BP56557 Y_RNA.303-201ENST00000364998 94 ntBASIC2.53□□□□□ -2
TMEM50BP56557 RNU4-66P-201ENST00000365199 138 ntBASIC2.53□□□□□ -2
TMEM50BP56557 RNU6-715P-201ENST00000365204 103 ntBASIC2.53□□□□□ -2
TMEM50BP56557 RNU6-1127P-201ENST00000384580 107 ntBASIC2.53□□□□□ -2
TMEM50BP56557 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.53□□□□□ -2
TMEM50BP56557 RNU6-332P-201ENST00000391193 108 ntBASIC2.53□□□□□ -2
TMEM50BP56557 Y_RNA.615-201ENST00000410769 117 ntBASIC2.53□□□□□ -2
TMEM50BP56557 RNU6-387P-201ENST00000411331 105 ntBASIC2.53□□□□□ -2
TMEM50BP56557 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.53□□□□□ -2
TMEM50BP56557 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.53□□□□□ -2
TMEM50BP56557 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms