Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNA5SP519-201ENST00000516480 119 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 RNU6-572P-201ENST00000516724 80 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 RNU7-143P-201ENST00000516781 65 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 RNU6-1073P-201ENST00000517182 106 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 AP005902.1-201ENST00000521358 186 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.03□□□□□ -1.76
NPHS1O60500 AC107016.1-201ENST00000550463 337 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 GNRHR2P1-201ENST00000555315 631 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 AC005357.1-201ENST00000588399 301 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 RAC1P9-201ENST00000604990 392 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 MIR6730-201ENST00000622213 67 ntBASIC4.03□□□□□ -1.76
NPHS1O60500 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.03□□□□□ -1.76
NPHS1O60500 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
NPHS1O60500 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NPHS1O60500 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NPHS1O60500 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPHS1O60500 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.77
NPHS1O60500 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
NPHS1O60500 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.02□□□□□ -1.77
NPHS1O60500 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 Z82217.1-201ENST00000625157 8149 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 AC079741.1-201ENST00000321498 212 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 RNVU1-6-201ENST00000364688 164 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 SNORA51.11-201ENST00000384442 131 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 Y_RNA.551-201ENST00000384661 102 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC016769.2-201ENST00000414815 475 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHS1O60500 AL159987.2-201ENST00000432754 307 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC133473.1-201ENST00000455173 299 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHS1O60500 RPL23AP24-201ENST00000458203 385 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC092798.1-201ENST00000458542 409 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHS1O60500 AK3P2-201ENST00000507976 429 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC023141.12-201ENST00000512399 199 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 FTH1P9-201ENST00000513251 355 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 RNA5SP49-201ENST00000516450 115 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 RNA5SP291-201ENST00000517222 105 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC144568.1-201ENST00000520139 137 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHS1O60500 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.02□□□□□ -1.77
NPHS1O60500 AL645944.1-201ENST00000603857 493 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC004805.2-201ENST00000605382 482 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 Mico1.1-201ENST00000611698 204 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 AC090617.7-201ENST00000623952 126 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.02□□□□□ -1.77
NPHS1O60500 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.02□□□□□ -1.77
NPHS1O60500 MTND5P9-201ENST00000503854 1755 ntBASIC4.02□□□□□ -1.77
NPHS1O60500 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPHS1O60500 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPHS1O60500 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHS1O60500 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NPHS1O60500 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHS1O60500 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPHS1O60500 U3.6-201ENST00000363622 211 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 RNU6-806P-201ENST00000365147 105 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 Y_RNA.461-201ENST00000384263 103 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 MT-TW-201ENST00000387382 68 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 RNU2-68P-201ENST00000410878 191 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC009310.1-201ENST00000414414 451 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHS1O60500 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHS1O60500 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHS1O60500 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 snoU109.2-201ENST00000459316 135 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC078918.1-201ENST00000498515 228 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.01□□□□□ -1.77
NPHS1O60500 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHS1O60500 AC107222.1-201ENST00000510899 637 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 IGHV3-76-201ENST00000522465 295 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC090281.1-201ENST00000523019 276 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AP006289.1-201ENST00000538089 277 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC022655.2-201ENST00000577280 318 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHS1O60500 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHS1O60500 SRGNP1-201ENST00000603392 451 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 AC004825.2-201ENST00000616634 455 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHS1O60500 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHS1O60500 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPHS1O60500 AC233263.6-201ENST00000631132 1963 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 IPO8P1-201ENST00000455509 3109 ntBASIC4.01□□□□□ -1.77
NPHS1O60500 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPHS1O60500 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4□□□□□ -1.77
NPHS1O60500 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NPHS1O60500 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPHS1O60500 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPHS1O60500 Y_RNA.64-201ENST00000362845 102 ntBASIC4□□□□□ -1.77
NPHS1O60500 SNORD50.1-201ENST00000362987 71 ntBASIC4□□□□□ -1.77
NPHS1O60500 Y_RNA.276-201ENST00000364732 109 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms