Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 TIMM9P1-201ENST00000436122 256 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AL451074.3-201ENST00000437709 472 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 RPS15AP9-201ENST00000439856 381 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 MTND3P1-201ENST00000441336 220 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 NEFMP1-201ENST00000443423 1006 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AL118520.1-201ENST00000450770 291 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC023194.1-201ENST00000493084 308 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 SNORA25.11-201ENST00000515935 105 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 RNA5SP137-201ENST00000516833 135 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC104763.2-201ENST00000604179 382 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC007363.1-201ENST00000604736 620 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AL355297.2-201ENST00000604792 129 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC034229.4-201ENST00000607861 441 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 AC009487.4-201ENST00000624969 3585 ntBASIC1.92□□□□□ -2.1
CCNB1IP1Q9NPC3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 RNU6-1280P-201ENST00000365211 107 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 MIR518D-201ENST00000385014 87 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC078974.1-201ENST00000411597 223 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AIMP1P2-201ENST00000425294 312 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AL353706.1-201ENST00000436728 494 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC009238.1-201ENST00000442165 424 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC009237.6-201ENST00000446969 424 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 EXOSC3P1-201ENST00000448649 500 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 MTATP6P14-201ENST00000455189 673 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 CYP2C59P-201ENST00000457790 269 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 snoU109.3-201ENST00000459477 145 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 RPL7P43-201ENST00000478876 753 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC107032.1-201ENST00000485945 480 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AP004247.1-201ENST00000531556 1289 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 SNRPGP18-201ENST00000553000 214 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 LINC00933-203ENST00000559812 219 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 BNIP3P9-201ENST00000603714 553 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 RNU6-91P-201ENST00000607774 107 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC010149.2-201ENST00000637608 315 ntBASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.91□□□□□ -2.1
CCNB1IP1Q9NPC3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 MIR1302-8-201ENST00000408342 128 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC127391.1-201ENST00000411737 98 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 RPS12P24-201ENST00000412619 387 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AL356320.1-201ENST00000429616 163 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AL161788.1-201ENST00000441805 169 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC112771.1-201ENST00000463581 102 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 RNU6-572P-201ENST00000516724 80 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 RNU6-678P-201ENST00000516832 109 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 RNU6-143P-201ENST00000516942 93 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC233702.2-202ENST00000562547 291 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 VN1R82P-201ENST00000601481 356 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC008555.8-201ENST00000623602 2168 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCNB1IP1Q9NPC3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.89□□□□□ -2.11
CCNB1IP1Q9NPC3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.89□□□□□ -2.11
CCNB1IP1Q9NPC3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCNB1IP1Q9NPC3 RNU6-898P-201ENST00000365627 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms