Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL355365.1-201ENST00000616480 294 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 MIR8057-201ENST00000620957 69 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.06□□□□□ -1.76
KRT40Q6A162 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KRT40Q6A162 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KRT40Q6A162 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.05□□□□□ -1.76
KRT40Q6A162 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRT40Q6A162 Y_RNA.202-201ENST00000364083 110 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AL360182.1-201ENST00000397433 468 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 MIR450B-201ENST00000401182 78 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 RNU6-954P-201ENST00000411355 107 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 RHEBP3-201ENST00000411920 351 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 RPLP0P7-201ENST00000416050 667 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 RPL31P12-201ENST00000422587 358 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.05□□□□□ -1.76
KRT40Q6A162 AL158071.1-201ENST00000430315 461 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.05□□□□□ -1.76
KRT40Q6A162 AL137792.2-201ENST00000443484 235 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.05□□□□□ -1.76
KRT40Q6A162 ELOCP24-201ENST00000456370 334 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 RNU7-167P-201ENST00000459160 62 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AC009901.1-201ENST00000506703 541 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 RN7SKP60-201ENST00000516985 239 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 RNU6-1213P-201ENST00000517075 94 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 DNAJC8P1-201ENST00000554535 372 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.05□□□□□ -1.76
KRT40Q6A162 MIR4458-201ENST00000578872 75 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.05□□□□□ -1.76
KRT40Q6A162 MIR4644-201ENST00000579929 84 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AC006116.10-201ENST00000591836 581 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.05□□□□□ -1.76
KRT40Q6A162 AC016925.2-201ENST00000605108 242 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AC019193.3-201ENST00000609144 554 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.05□□□□□ -1.76
KRT40Q6A162 U73479.1-201ENST00000618062 168 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 AC006065.5-201ENST00000623427 349 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.05□□□□□ -1.76
KRT40Q6A162 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.05□□□□□ -1.76
KRT40Q6A162 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
KRT40Q6A162 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRT40Q6A162 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.05□□□□□ -1.76
KRT40Q6A162 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRT40Q6A162 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRT40Q6A162 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
KRT40Q6A162 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRT40Q6A162 AL365361.1-201ENST00000566942 3481 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
KRT40Q6A162 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRT40Q6A162 RNU6-190P-201ENST00000384154 102 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 RNU6-393P-201ENST00000384475 107 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
KRT40Q6A162 U3.26-201ENST00000391236 204 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 MIR1289-1-201ENST00000408836 144 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
KRT40Q6A162 RPL7P37-201ENST00000425095 738 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 AC017083.1-201ENST00000428093 483 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 AC005326.1-201ENST00000429197 123 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.04□□□□□ -1.76
KRT40Q6A162 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.04□□□□□ -1.76
KRT40Q6A162 U3.44-201ENST00000458938 192 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 AC026784.1-201ENST00000507986 352 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 RPL39P5-202ENST00000512505 151 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 SNORA14.1-201ENST00000516113 141 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 RNU6-1046P-201ENST00000516538 107 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 AC022634.1-201ENST00000520765 532 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.04□□□□□ -1.76
KRT40Q6A162 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.04□□□□□ -1.76
KRT40Q6A162 AC018630.1-201ENST00000541376 925 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.04□□□□□ -1.76
KRT40Q6A162 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
KRT40Q6A162 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.04□□□□□ -1.76
KRT40Q6A162 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.04□□□□□ -1.76
KRT40Q6A162 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.04□□□□□ -1.76
KRT40Q6A162 MTND5P42-201ENST00000637720 498 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.04□□□□□ -1.76
KRT40Q6A162 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRT40Q6A162 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRT40Q6A162 AL136964.1-201ENST00000622038 2990 ntBASIC4.04□□□□□ -1.76
KRT40Q6A162 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRT40Q6A162 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
KRT40Q6A162 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRT40Q6A162 RNU6-76P-201ENST00000384060 104 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 RNU6-356P-201ENST00000384140 107 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 Y_RNA.482-201ENST00000384377 111 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 RNU6-837P-201ENST00000391056 108 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 SNORA48.5-201ENST00000391143 135 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.03□□□□□ -1.76
KRT40Q6A162 AL139396.1-201ENST00000421137 167 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 AL590632.1-201ENST00000424289 371 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 AC079780.1-201ENST00000428259 207 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 CYCSP4-201ENST00000429682 331 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.03□□□□□ -1.76
KRT40Q6A162 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.03□□□□□ -1.76
KRT40Q6A162 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.03□□□□□ -1.76
KRT40Q6A162 AL357552.1-201ENST00000445254 415 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 SNORD105B-201ENST00000458770 79 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.03□□□□□ -1.76
KRT40Q6A162 MTCYBP40-201ENST00000509390 1135 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.03□□□□□ -1.76
KRT40Q6A162 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms