Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2surpQ6NV83 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
U2surpQ6NV83 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
U2surpQ6NV83 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.83■□□□□ 0.92
U2surpQ6NV83 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Gm12644-201ENSMUST00000119935 606 ntBASIC20.82■□□□□ 0.92
U2surpQ6NV83 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Birc2-201ENSMUST00000054878 378 ntBASIC20.82■□□□□ 0.92
U2surpQ6NV83 Gm7461-201ENSMUST00000058918 827 ntBASIC20.82■□□□□ 0.92
U2surpQ6NV83 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2surpQ6NV83 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Gm15165-201ENSMUST00000118140 502 ntBASIC20.81■□□□□ 0.92
U2surpQ6NV83 Gm15372-201ENSMUST00000120729 834 ntBASIC20.81■□□□□ 0.92
U2surpQ6NV83 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Gm43347-201ENSMUST00000200226 580 ntBASIC20.81■□□□□ 0.92
U2surpQ6NV83 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
U2surpQ6NV83 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
U2surpQ6NV83 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
U2surpQ6NV83 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
U2surpQ6NV83 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 269.8 ms