Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC025678.1-201ENST00000567861 338 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 LARP7P3-201ENST00000579888 337 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC002545.1-201ENST00000592511 181 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC007363.1-201ENST00000604736 620 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AL035413.2-201ENST00000604801 525 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AP001330.5-201ENST00000607176 411 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 OR10AB1P-201ENST00000609613 938 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC004696.1-201ENST00000614345 607 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC104985.2-201ENST00000620598 500 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC006386.2-201ENST00000624491 75 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC012005.1-201ENST00000624575 75 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC092435.3-201ENST00000565538 3654 ntBASIC3.15□□□□□ -1.9
DDX43Q9NXZ2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DDX43Q9NXZ2 Y_RNA.70-201ENST00000362886 110 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 MIR19A-201ENST00000384878 82 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 MT-TL1-201ENST00000386347 75 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 RNU2-33P-201ENST00000410344 192 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL139413.1-201ENST00000421309 217 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC092047.1-201ENST00000424997 240 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC007919.1-201ENST00000429380 217 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 RNU7-59P-201ENST00000459101 61 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC007182.2-201ENST00000489251 402 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC098799.2-201ENST00000509466 868 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 Y_RNA.702-201ENST00000516843 96 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 RNU6-1220P-201ENST00000517126 108 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AP003072.2-201ENST00000527756 676 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AP001646.1-201ENST00000527936 915 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL512310.1-201ENST00000548639 172 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL356432.3-201ENST00000568952 465 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC008752.3-201ENST00000588113 712 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC012119.1-201ENST00000603184 222 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC007038.2-201ENST00000608095 740 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC005609.4-201ENST00000625071 447 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AC010149.2-201ENST00000637608 315 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 AL035425.3-201ENST00000564206 4996 ntBASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DDX43Q9NXZ2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 Y_RNA.295-201ENST00000364918 102 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 RNU6-908P-201ENST00000410160 94 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 RNU2-41P-201ENST00000410991 178 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC245054.2-201ENST00000415639 319 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC019097.1-201ENST00000424783 735 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 USP12PX-201ENST00000432383 1057 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 FCF1P1-201ENST00000432690 571 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 RPS15AP9-201ENST00000439856 381 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 MTND4P25-201ENST00000441039 533 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 KC877373.1-201ENST00000479066 408 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC055855.1-201ENST00000489563 579 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC083906.5-201ENST00000503722 328 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 RNU6-507P-201ENST00000516045 100 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 Vault.3-201ENST00000516676 95 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 ATP5F1P5-201ENST00000526403 760 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC104383.1-201ENST00000530297 370 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AL512360.1-201ENST00000555346 234 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC034105.3-201ENST00000565294 442 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC060780.3-201ENST00000589464 80 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC078899.3-201ENST00000599065 212 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC068790.3-201ENST00000602988 553 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 MIR98-201ENST00000606724 119 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC009994.1-201ENST00000606889 253 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AL020991.1-201ENST00000612314 373 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms