Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.72□□□□□ -1.65
NFKB1P19838 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.72□□□□□ -1.65
NFKB1P19838 AC091042.1-201ENST00000579213 173 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.72□□□□□ -1.65
NFKB1P19838 AC011921.3-201ENST00000605540 361 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 U6.106-201ENST00000636360 105 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AL365440.1-201ENST00000436135 2167 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.72□□□□□ -1.65
NFKB1P19838 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NFKB1P19838 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.72□□□□□ -1.65
NFKB1P19838 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NFKB1P19838 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
NFKB1P19838 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.72□□□□□ -1.65
NFKB1P19838 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.72□□□□□ -1.65
NFKB1P19838 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
NFKB1P19838 ZNF826P-207ENST00000622273 1910 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AC090971.4-201ENST00000560291 1800 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.72□□□□□ -1.65
NFKB1P19838 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NFKB1P19838 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
NFKB1P19838 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
NFKB1P19838 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.71□□□□□ -1.66
NFKB1P19838 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NFKB1P19838 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NFKB1P19838 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NFKB1P19838 DEFB108F-201ENST00000344638 222 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 RNU5E-7P-201ENST00000365290 117 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 RNU6-166P-201ENST00000384371 107 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 RN7SKP51-201ENST00000410781 304 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.71□□□□□ -1.66
NFKB1P19838 AP000907.1-201ENST00000428428 510 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.71□□□□□ -1.66
NFKB1P19838 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.71□□□□□ -1.66
NFKB1P19838 AC083982.1-201ENST00000485679 344 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 AC010265.1-201ENST00000513509 211 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 RNU4-60P-201ENST00000517239 135 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 ATP5F1P5-201ENST00000526403 760 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 AC025884.1-201ENST00000556034 378 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.71□□□□□ -1.66
NFKB1P19838 FAM60BP-201ENST00000578364 658 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 AC010928.2-201ENST00000588017 287 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.71□□□□□ -1.66
NFKB1P19838 AC037487.3-201ENST00000606668 112 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 FAM25E-202ENST00000608562 189 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 SCARNA4-201ENST00000629045 128 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NFKB1P19838 AC027290.2-201ENST00000623210 18662 ntBASIC4.71□□□□□ -1.66
NFKB1P19838 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
NFKB1P19838 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
NFKB1P19838 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NFKB1P19838 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.71□□□□□ -1.66
NFKB1P19838 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NFKB1P19838 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.7□□□□□ -1.66
NFKB1P19838 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NFKB1P19838 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
NFKB1P19838 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.7□□□□□ -1.66
NFKB1P19838 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NFKB1P19838 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
NFKB1P19838 Y_RNA.240-201ENST00000364469 95 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 SNORD50B-201ENST00000364995 70 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 RNU6-81P-201ENST00000365608 104 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 BTF3L4P2-201ENST00000392798 346 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.7□□□□□ -1.66
NFKB1P19838 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 DNAJC19P7-201ENST00000428811 344 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.7□□□□□ -1.66
NFKB1P19838 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.7□□□□□ -1.66
NFKB1P19838 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NFKB1P19838 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 RPL23AP81-201ENST00000455252 467 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 RPL23AP65-201ENST00000475608 468 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 IGLV2-34-201ENST00000490007 283 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 SNORA31.18-201ENST00000517043 134 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.7□□□□□ -1.66
NFKB1P19838 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.7□□□□□ -1.66
NFKB1P19838 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 MIR4282-201ENST00000583613 67 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
NFKB1P19838 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.7□□□□□ -1.66
NFKB1P19838 AC091953.3-201ENST00000623220 236 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 U3.53-201ENST00000628922 216 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 AC233981.2-201ENST00000611524 1614 ntBASIC4.7□□□□□ -1.66
NFKB1P19838 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.7□□□□□ -1.66
NFKB1P19838 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NFKB1P19838 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NFKB1P19838 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NFKB1P19838 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NFKB1P19838 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NFKB1P19838 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NFKB1P19838 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NFKB1P19838 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NFKB1P19838 SNORA58B-201ENST00000364259 136 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 Y_RNA.286-201ENST00000364813 102 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms