Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
KLF4O43474 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KLF4O43474 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
KLF4O43474 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
KLF4O43474 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KLF4O43474 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.06□□□□□ -1.76
KLF4O43474 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
KLF4O43474 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KLF4O43474 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
KLF4O43474 RNU6-942P-201ENST00000363002 107 ntBASIC4.06□□□□□ -1.76
KLF4O43474 RNA5SP447-201ENST00000363749 119 ntBASIC4.06□□□□□ -1.76
KLF4O43474 MIR606-201ENST00000384851 96 ntBASIC4.06□□□□□ -1.76
KLF4O43474 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KLF4O43474 RNU6-1077P-201ENST00000410506 102 ntBASIC4.06□□□□□ -1.76
KLF4O43474 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.06□□□□□ -1.76
KLF4O43474 AC245291.1-201ENST00000419501 328 ntBASIC4.06□□□□□ -1.76
KLF4O43474 PMCHL1-202ENST00000423102 261 ntBASIC4.06□□□□□ -1.76
KLF4O43474 AC018865.2-201ENST00000423631 129 ntBASIC4.06□□□□□ -1.76
KLF4O43474 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.06□□□□□ -1.76
KLF4O43474 CYCSP32-201ENST00000440548 321 ntBASIC4.06□□□□□ -1.76
KLF4O43474 RPL7AP28-201ENST00000464513 571 ntBASIC4.06□□□□□ -1.76
KLF4O43474 MRPL42P6-201ENST00000486397 371 ntBASIC4.06□□□□□ -1.76
KLF4O43474 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.06□□□□□ -1.76
KLF4O43474 SNORA25.10-201ENST00000515926 124 ntBASIC4.06□□□□□ -1.76
KLF4O43474 RNU6-327P-201ENST00000516270 127 ntBASIC4.06□□□□□ -1.76
KLF4O43474 RNU6-699P-201ENST00000517081 110 ntBASIC4.06□□□□□ -1.76
KLF4O43474 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.06□□□□□ -1.76
KLF4O43474 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KLF4O43474 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.06□□□□□ -1.76
KLF4O43474 AC063950.1-201ENST00000552036 308 ntBASIC4.06□□□□□ -1.76
KLF4O43474 SUB1P3-201ENST00000564581 315 ntBASIC4.06□□□□□ -1.76
KLF4O43474 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.06□□□□□ -1.76
KLF4O43474 AL160290.3-201ENST00000604869 165 ntBASIC4.06□□□□□ -1.76
KLF4O43474 AL355802.3-201ENST00000607571 545 ntBASIC4.06□□□□□ -1.76
KLF4O43474 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
KLF4O43474 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.06□□□□□ -1.76
KLF4O43474 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.06□□□□□ -1.76
KLF4O43474 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KLF4O43474 MTND5P9-201ENST00000503854 1755 ntBASIC4.06□□□□□ -1.76
KLF4O43474 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.06□□□□□ -1.76
KLF4O43474 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.06□□□□□ -1.76
KLF4O43474 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
KLF4O43474 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KLF4O43474 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.06□□□□□ -1.76
KLF4O43474 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.05□□□□□ -1.76
KLF4O43474 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
KLF4O43474 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.05□□□□□ -1.76
KLF4O43474 MTND5P30-201ENST00000452896 1731 ntBASIC4.05□□□□□ -1.76
KLF4O43474 Y_RNA.5-201ENST00000362334 102 ntBASIC4.05□□□□□ -1.76
KLF4O43474 Y_RNA.132-201ENST00000363421 102 ntBASIC4.05□□□□□ -1.76
KLF4O43474 RNA5SP28-201ENST00000363841 119 ntBASIC4.05□□□□□ -1.76
KLF4O43474 MIR659-201ENST00000384963 97 ntBASIC4.05□□□□□ -1.76
KLF4O43474 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.05□□□□□ -1.76
KLF4O43474 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KLF4O43474 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KLF4O43474 RNU6-308P-201ENST00000390957 107 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.05□□□□□ -1.76
KLF4O43474 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.05□□□□□ -1.76
KLF4O43474 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.05□□□□□ -1.76
KLF4O43474 AL714022.1-201ENST00000439897 151 ntBASIC4.05□□□□□ -1.76
KLF4O43474 RPS3AP46-201ENST00000448352 682 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.05□□□□□ -1.76
KLF4O43474 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.05□□□□□ -1.76
KLF4O43474 AC012671.1-201ENST00000451912 203 ntBASIC4.05□□□□□ -1.76
KLF4O43474 FTH1P2-201ENST00000466086 412 ntBASIC4.05□□□□□ -1.76
KLF4O43474 RNU5F-8P-201ENST00000515941 111 ntBASIC4.05□□□□□ -1.76
KLF4O43474 RNU6-581P-201ENST00000516214 105 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.05□□□□□ -1.76
KLF4O43474 AP001781.1-201ENST00000530977 207 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AC006199.1-201ENST00000548728 219 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AC136624.4-201ENST00000573044 370 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AC009163.5-201ENST00000575421 637 ntBASIC4.05□□□□□ -1.76
KLF4O43474 MIR4474-201ENST00000579189 78 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AC023575.1-201ENST00000580510 358 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AL360085.1-201ENST00000604713 532 ntBASIC4.05□□□□□ -1.76
KLF4O43474 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.05□□□□□ -1.76
KLF4O43474 AC090617.7-201ENST00000623952 126 ntBASIC4.05□□□□□ -1.76
KLF4O43474 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.05□□□□□ -1.76
KLF4O43474 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.05□□□□□ -1.76
KLF4O43474 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.05□□□□□ -1.76
KLF4O43474 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KLF4O43474 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
KLF4O43474 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.05□□□□□ -1.76
KLF4O43474 ZNF299P-201ENST00000406845 1804 ntBASIC4.05□□□□□ -1.76
KLF4O43474 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KLF4O43474 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
KLF4O43474 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KLF4O43474 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KLF4O43474 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.04□□□□□ -1.76
KLF4O43474 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KLF4O43474 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
KLF4O43474 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms