Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC241585.2-209ENST00000638217 143 ntBASIC6.75□□□□□ -1.33
CCDC61Q9Y6R9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC61Q9Y6R9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC61Q9Y6R9 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC61Q9Y6R9 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC61Q9Y6R9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 RNY1P11-201ENST00000363759 113 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 RNA5SP173-201ENST00000364857 136 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 Y_RNA.329-201ENST00000365209 107 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 Y_RNA.630-201ENST00000411370 108 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 AL158147.1-201ENST00000443970 75 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 AC245047.8-201ENST00000456455 284 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 AC092798.1-201ENST00000458542 409 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 RPS23P7-201ENST00000466210 444 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 RPL31P13-201ENST00000484151 370 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 AC022726.1-201ENST00000587475 207 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 FAM27B-201ENST00000610601 213 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 MAPK10-263ENST00000641052 4307 ntBASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC61Q9Y6R9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 AL590240.1-201ENST00000334118 313 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 RNU6-527P-201ENST00000363425 104 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 AC139453.3-201ENST00000493276 369 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 AC016256.1-201ENST00000547971 354 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 MIR4715-201ENST00000584117 79 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 AL445567.2-201ENST00000618935 498 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 AC019206.1-201ENST00000621938 425 ntBASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCDC61Q9Y6R9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 RNA5SP453-201ENST00000362503 119 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 SNORD115-8-201ENST00000363856 82 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 SNORD115-38-201ENST00000365037 82 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 SAGE2P-201ENST00000420011 2126 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AL358075.3-201ENST00000426289 226 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC007560.1-201ENST00000426912 237 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 RPL23AP1-201ENST00000428990 471 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC016831.4-201ENST00000438302 307 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 RPL39P29-201ENST00000447779 157 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC136628.3-201ENST00000521868 290 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC136624.4-201ENST00000573044 370 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC006380.1-201ENST00000603598 186 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 AC010329.2-201ENST00000595195 2737 ntBASIC6.72□□□□□ -1.33
CCDC61Q9Y6R9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.71□□□□□ -1.33
CCDC61Q9Y6R9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC61Q9Y6R9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC61Q9Y6R9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC61Q9Y6R9 AC116096.1-201ENST00000566804 2314 ntBASIC6.71□□□□□ -1.33
CCDC61Q9Y6R9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
CCDC61Q9Y6R9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
CCDC61Q9Y6R9 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 RNU6-801P-201ENST00000364087 105 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 SNORD113.2-201ENST00000364166 89 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 Y_RNA.287-201ENST00000364853 94 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 RNU6-728P-201ENST00000365375 104 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 Y_RNA.572-201ENST00000384757 98 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 SNORA40C-201ENST00000391285 128 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 AC009963.1-201ENST00000417265 157 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 AL645608.4-201ENST00000423619 154 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 RPL12P46-201ENST00000436610 195 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 AL110118.1-201ENST00000553543 400 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 ZNF192P1-203ENST00000565888 810 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 AL022401.1-201ENST00000619498 108 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 SCARNA4-202ENST00000625402 129 ntBASIC6.71□□□□□ -1.34
CCDC61Q9Y6R9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms