Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNU1-72P-201ENST00000362976 153 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU5A-8P-201ENST00000364102 114 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 SNORA67.4-201ENST00000384688 142 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 SNORA46.1-201ENST00000391069 153 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 OR51A5P-201ENST00000415429 942 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 RPS24P7-201ENST00000416921 246 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 UBE2FP3-201ENST00000436366 524 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 RPL7P18-201ENST00000478965 734 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AC022493.1-201ENST00000492984 337 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 RPL22P13-201ENST00000493291 347 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AC106872.3-201ENST00000495104 446 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 SMURF2P1-201ENST00000514992 481 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU6-581P-201ENST00000516214 105 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AL592221.1-201ENST00000605266 382 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 BCRP9-201ENST00000605312 388 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AC097468.3-201ENST00000607956 456 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 Z75746.1-201ENST00000440243 2080 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 RNA5SP289-201ENST00000362332 137 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU6-769P-201ENST00000384407 104 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU4-53P-201ENST00000410828 140 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 LARP1BP3-201ENST00000437229 869 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC018634.1-201ENST00000437554 401 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC117503.1-201ENST00000472241 394 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 RPL23AP49-201ENST00000492925 468 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC104090.1-201ENST00000506341 1171 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 MTCYBP43-201ENST00000513621 740 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU2-19P-201ENST00000517288 84 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AP003122.3-201ENST00000526316 255 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 DUXAP1-201ENST00000556632 463 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC022662.1-201ENST00000580252 331 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 MIR4435-1-201ENST00000582552 80 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 BNIP3P23-201ENST00000599655 511 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AL358072.1-201ENST00000604156 575 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC098657.3-201ENST00000620434 263 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AL049777.1-201ENST00000622740 518 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC099654.9-201ENST00000637055 678 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 AC099654.8-201ENST00000637757 681 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.97□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU4-82P-201ENST00000362443 140 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 RNU4-92P-201ENST00000363783 136 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 BTF3P7-201ENST00000407097 488 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 RNU2-63P-201ENST00000410792 194 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 PIGPP2-201ENST00000411569 458 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC097463.2-201ENST00000421074 142 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 RPL7P34-201ENST00000433316 712 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC090515.1-201ENST00000465295 476 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 UBE2DNL-203ENST00000474922 222 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC010486.1-201ENST00000511793 424 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC119751.5-201ENST00000514077 770 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC084851.1-201ENST00000529105 249 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 ANP32BP3-201ENST00000559213 706 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC080013.3-201ENST00000606839 578 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC072039.2-201ENST00000608883 439 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AL355472.4-201ENST00000610233 626 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 AC138627.2-201ENST00000624202 601 ntBASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNB1IP1Q9NPC3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCNB1IP1Q9NPC3 SNORA4.1-201ENST00000364263 144 ntBASIC1.95□□□□□ -2.1
CCNB1IP1Q9NPC3 RNU4-68P-201ENST00000364314 141 ntBASIC1.95□□□□□ -2.1
CCNB1IP1Q9NPC3 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
CCNB1IP1Q9NPC3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.95□□□□□ -2.1
CCNB1IP1Q9NPC3 RNU6-723P-201ENST00000383973 107 ntBASIC1.95□□□□□ -2.1
CCNB1IP1Q9NPC3 Y_RNA.500-201ENST00000384466 111 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms