Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN5P54829 AC004980.4-201ENST00000513375 203 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 SNORA70.11-201ENST00000515987 138 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 SNORA70.13-201ENST00000516116 138 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 HMGB1P40-201ENST00000525121 540 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN5P54829 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN5P54829 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN5P54829 AC069307.1-201ENST00000602820 447 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 MIR4275-201ENST00000636486 87 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 AC073869.8-201ENST00000641806 335 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN5P54829 AL138820.1-201ENST00000617901 5305 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN5P54829 BCORP1-203ENST00000513194 5093 ntBASIC5.63□□□□□ -1.51
PTPN5P54829 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN5P54829 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN5P54829 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN5P54829 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN5P54829 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPN5P54829 AC090971.4-201ENST00000560291 1800 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN5P54829 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPN5P54829 Y_RNA.24-201ENST00000362508 103 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 RNU6-249P-201ENST00000363016 102 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 SNORA26.5-201ENST00000391215 123 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 AL009179.1-201ENST00000406085 265 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 SNORA11.2-201ENST00000408318 127 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 U6atac.2-201ENST00000408644 118 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 RNU2-50P-201ENST00000410494 143 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 RNA5SP225-201ENST00000410874 135 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 AP000936.3-201ENST00000438127 255 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 AL590399.6-201ENST00000446396 307 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 RNU6-155P-201ENST00000516347 100 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 AC136777.2-201ENST00000522979 358 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 AC084851.1-201ENST00000529105 249 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTPN5P54829 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.62□□□□□ -1.51
PTPN5P54829 AC004467.1-201ENST00000615678 330 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 AC000095.2-202ENST00000637415 154 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN5P54829 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTPN5P54829 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN5P54829 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 AL353743.1-202ENST00000431724 1695 ntBASIC5.62□□□□□ -1.51
PTPN5P54829 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PTPN5P54829 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPN5P54829 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN5P54829 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN5P54829 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PTPN5P54829 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PTPN5P54829 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN5P54829 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTPN5P54829 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PTPN5P54829 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 RNU6-228P-201ENST00000362700 106 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 RNU6-1048P-201ENST00000364054 107 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 RNU6-356P-201ENST00000384140 107 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 MIR23B-201ENST00000384832 97 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN5P54829 AL158156.1-201ENST00000422509 473 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 RPS27AP12-201ENST00000429552 465 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 GSTM5P1-201ENST00000434751 660 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 HSPE1P21-201ENST00000438283 308 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.61□□□□□ -1.51
PTPN5P54829 RNU6-927P-201ENST00000516199 100 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 SNORA40.13-201ENST00000516379 120 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 RNU6-58P-201ENST00000517143 103 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 IGLV3-24-201ENST00000517477 197 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 AC018630.3-201ENST00000542637 96 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN5P54829 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.61□□□□□ -1.51
PTPN5P54829 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN5P54829 NF1P5-201ENST00000588287 448 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN5P54829 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 AC018529.3-201ENST00000624212 2254 ntBASIC5.61□□□□□ -1.51
PTPN5P54829 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN5P54829 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms