Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SOD1P00441 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SOD1P00441 RNU6-884P-201ENST00000363889 107 ntBASIC1.61□□□□□ -2.15
SOD1P00441 RNU6-457P-201ENST00000363999 107 ntBASIC1.61□□□□□ -2.15
SOD1P00441 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.61□□□□□ -2.15
SOD1P00441 RNU6-1257P-201ENST00000384625 110 ntBASIC1.61□□□□□ -2.15
SOD1P00441 AL590084.2-201ENST00000401481 382 ntBASIC1.61□□□□□ -2.15
SOD1P00441 USP9YP13-201ENST00000417797 480 ntBASIC1.61□□□□□ -2.15
SOD1P00441 BPY2DP-201ENST00000422208 265 ntBASIC1.61□□□□□ -2.15
SOD1P00441 BX119904.4-201ENST00000424402 301 ntBASIC1.61□□□□□ -2.15
SOD1P00441 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.61□□□□□ -2.15
SOD1P00441 USP12PX-201ENST00000432383 1057 ntBASIC1.61□□□□□ -2.15
SOD1P00441 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.61□□□□□ -2.15
SOD1P00441 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.61□□□□□ -2.15
SOD1P00441 COX7BP2-201ENST00000437976 242 ntBASIC1.61□□□□□ -2.15
SOD1P00441 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.61□□□□□ -2.15
SOD1P00441 MTND5P14-201ENST00000441481 1267 ntBASIC1.61□□□□□ -2.15
SOD1P00441 OSTCP8-201ENST00000445117 448 ntBASIC1.61□□□□□ -2.15
SOD1P00441 AC002381.1-201ENST00000447049 280 ntBASIC1.61□□□□□ -2.15
SOD1P00441 USP9YP10-201ENST00000454868 628 ntBASIC1.61□□□□□ -2.15
SOD1P00441 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.61□□□□□ -2.15
SOD1P00441 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.61□□□□□ -2.15
SOD1P00441 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.61□□□□□ -2.15
SOD1P00441 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.61□□□□□ -2.15
SOD1P00441 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.61□□□□□ -2.15
SOD1P00441 OR6C7P-201ENST00000547875 934 ntBASIC1.61□□□□□ -2.15
SOD1P00441 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.61□□□□□ -2.15
SOD1P00441 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.61□□□□□ -2.15
SOD1P00441 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.61□□□□□ -2.15
SOD1P00441 AC007349.4-201ENST00000608114 532 ntBASIC1.61□□□□□ -2.15
SOD1P00441 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.61□□□□□ -2.15
SOD1P00441 AC068057.2-201ENST00000624047 895 ntBASIC1.61□□□□□ -2.15
SOD1P00441 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.61□□□□□ -2.15
SOD1P00441 U2.21-201ENST00000637295 81 ntBASIC1.61□□□□□ -2.15
SOD1P00441 AC080128.1-201ENST00000474389 1917 ntBASIC1.61□□□□□ -2.15
SOD1P00441 ZNF876P-202ENST00000398732 1485 ntBASIC1.61□□□□□ -2.15
SOD1P00441 MTND4P23-201ENST00000447723 1363 ntBASIC1.6□□□□□ -2.15
SOD1P00441 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SOD1P00441 RNU6-97P-201ENST00000363387 104 ntBASIC1.6□□□□□ -2.15
SOD1P00441 RNU6-234P-201ENST00000365229 104 ntBASIC1.6□□□□□ -2.15
SOD1P00441 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.6□□□□□ -2.15
SOD1P00441 RNU1-39P-201ENST00000383897 165 ntBASIC1.6□□□□□ -2.15
SOD1P00441 RNU6-1207P-201ENST00000384343 107 ntBASIC1.6□□□□□ -2.15
SOD1P00441 RNU6-220P-201ENST00000390919 107 ntBASIC1.6□□□□□ -2.15
SOD1P00441 RPL23AP29-201ENST00000397284 453 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 AC007919.1-201ENST00000429380 217 ntBASIC1.6□□□□□ -2.15
SOD1P00441 HMGB1P9-201ENST00000429856 646 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.6□□□□□ -2.15
SOD1P00441 AC098831.1-201ENST00000440661 216 ntBASIC1.6□□□□□ -2.15
SOD1P00441 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 PSPHP1-201ENST00000450062 261 ntBASIC1.6□□□□□ -2.15
SOD1P00441 RPL12P25-201ENST00000455592 494 ntBASIC1.6□□□□□ -2.15
SOD1P00441 RPL26P9-201ENST00000457466 433 ntBASIC1.6□□□□□ -2.15
SOD1P00441 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.6□□□□□ -2.15
SOD1P00441 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 DEFB131D-201ENST00000526803 184 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AC084851.1-201ENST00000529105 249 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.6□□□□□ -2.15
SOD1P00441 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.6□□□□□ -2.15
SOD1P00441 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AC090897.2-201ENST00000581715 130 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.6□□□□□ -2.15
SOD1P00441 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AC107308.1-201ENST00000615897 301 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AL449363.1-201ENST00000617815 186 ntBASIC1.6□□□□□ -2.15
SOD1P00441 AC092447.10-201ENST00000620607 1652 ntBASIC1.6□□□□□ -2.15
SOD1P00441 MTND4P27-201ENST00000450813 1354 ntBASIC1.59□□□□□ -2.15
SOD1P00441 SNORA16B-201ENST00000364674 135 ntBASIC1.59□□□□□ -2.15
SOD1P00441 RNU6-1083P-201ENST00000384022 107 ntBASIC1.59□□□□□ -2.15
SOD1P00441 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SOD1P00441 RNU2-49P-201ENST00000410666 184 ntBASIC1.59□□□□□ -2.15
SOD1P00441 RN7SKP101-201ENST00000411376 320 ntBASIC1.59□□□□□ -2.15
SOD1P00441 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.59□□□□□ -2.15
SOD1P00441 TIMM9P2-201ENST00000419324 266 ntBASIC1.59□□□□□ -2.15
SOD1P00441 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.59□□□□□ -2.15
SOD1P00441 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.59□□□□□ -2.15
SOD1P00441 ZYG11AP1-201ENST00000430329 837 ntBASIC1.59□□□□□ -2.15
SOD1P00441 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.59□□□□□ -2.15
SOD1P00441 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.59□□□□□ -2.15
SOD1P00441 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
SOD1P00441 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.59□□□□□ -2.15
SOD1P00441 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.59□□□□□ -2.15
SOD1P00441 MTATP6P7-201ENST00000453315 681 ntBASIC1.59□□□□□ -2.15
SOD1P00441 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.59□□□□□ -2.15
SOD1P00441 AC104563.1-201ENST00000476147 376 ntBASIC1.59□□□□□ -2.15
SOD1P00441 RPS27AP10-201ENST00000496103 208 ntBASIC1.59□□□□□ -2.15
SOD1P00441 CKS1BP2-201ENST00000497342 240 ntBASIC1.59□□□□□ -2.15
SOD1P00441 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.59□□□□□ -2.15
SOD1P00441 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.59□□□□□ -2.15
SOD1P00441 RNU6-840P-201ENST00000517275 65 ntBASIC1.59□□□□□ -2.15
SOD1P00441 AL132657.2-201ENST00000564417 358 ntBASIC1.59□□□□□ -2.15
SOD1P00441 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.59□□□□□ -2.15
SOD1P00441 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.59□□□□□ -2.15
SOD1P00441 AP000403.1-201ENST00000603349 851 ntBASIC1.59□□□□□ -2.15
SOD1P00441 AL357094.1-201ENST00000603845 844 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms