Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RPL21P129-201ENST00000491732 478 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.35□□□□□ -1.71
EPHB3P54753 AC020593.1-201ENST00000507399 299 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 RNU6-138P-201ENST00000515952 107 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.35□□□□□ -1.71
EPHB3P54753 HMGN1P28-201ENST00000521340 364 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AC007991.1-201ENST00000522680 631 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AP003385.6-201ENST00000531603 374 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.35□□□□□ -1.71
EPHB3P54753 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.35□□□□□ -1.71
EPHB3P54753 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.35□□□□□ -1.71
EPHB3P54753 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.35□□□□□ -1.71
EPHB3P54753 AC006130.2-201ENST00000586202 326 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 MTND4LP5-201ENST00000605152 292 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 SNORD91B-202ENST00000608459 222 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AC096772.1-201ENST00000609146 564 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AL589994.2-201ENST00000621124 579 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
EPHB3P54753 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHB3P54753 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
EPHB3P54753 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.34□□□□□ -1.71
EPHB3P54753 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHB3P54753 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHB3P54753 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
EPHB3P54753 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHB3P54753 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.34□□□□□ -1.71
EPHB3P54753 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
EPHB3P54753 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHB3P54753 SNORA60-201ENST00000362396 134 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 Y_RNA.314-201ENST00000365114 102 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 MIR554-201ENST00000384874 96 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC110754.1-201ENST00000399740 601 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 RN7SKP167-201ENST00000411047 285 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 RPS15AP40-201ENST00000419621 391 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AL590135.1-201ENST00000422215 156 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 ELOCP20-201ENST00000422460 345 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 UBE2V1P4-201ENST00000425374 344 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC006011.1-201ENST00000442758 349 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 MTND4LP30-201ENST00000454092 297 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 SNORA84-201ENST00000459229 133 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 RPL37P6-202ENST00000464216 403 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC084198.1-201ENST00000477747 402 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC110792.1-201ENST00000491826 472 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC105758.1-201ENST00000506038 399 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 Y_RNA.700-201ENST00000516806 100 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.34□□□□□ -1.71
EPHB3P54753 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 IFITM8P-201ENST00000522529 394 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.34□□□□□ -1.71
EPHB3P54753 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.34□□□□□ -1.71
EPHB3P54753 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.34□□□□□ -1.71
EPHB3P54753 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.34□□□□□ -1.71
EPHB3P54753 AC025423.5-201ENST00000550230 219 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 RPL21P7-201ENST00000557463 483 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 MIR7151-201ENST00000617477 60 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AC008785.1-201ENST00000624475 456 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 AL512643.1-201ENST00000635735 524 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 MIR6715B-201ENST00000637172 77 ntBASIC4.34□□□□□ -1.71
EPHB3P54753 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.34□□□□□ -1.71
EPHB3P54753 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.34□□□□□ -1.72
EPHB3P54753 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
EPHB3P54753 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
EPHB3P54753 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
EPHB3P54753 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
EPHB3P54753 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
EPHB3P54753 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHB3P54753 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHB3P54753 RNU4-42P-201ENST00000364738 142 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 Y_RNA.551-201ENST00000384661 102 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 Y_RNA.577-201ENST00000384794 101 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
EPHB3P54753 RNU6-1093P-201ENST00000391194 107 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 AL138885.1-201ENST00000405921 675 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 RNU4-65P-201ENST00000410473 140 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 UBE2FP1-201ENST00000416536 447 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 AL158071.1-201ENST00000430315 461 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHB3P54753 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.33□□□□□ -1.72
EPHB3P54753 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHB3P54753 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHB3P54753 AC108145.1-201ENST00000503770 153 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 AC092436.3-201ENST00000511788 257 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 SNORA25.11-201ENST00000515935 105 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 AC023632.4-201ENST00000517783 191 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHB3P54753 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.33□□□□□ -1.72
EPHB3P54753 HSPE1P20-201ENST00000538133 289 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 AC022080.3-201ENST00000544433 482 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHB3P54753 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHB3P54753 AC109446.1-201ENST00000566172 220 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHB3P54753 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.33□□□□□ -1.72
EPHB3P54753 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHB3P54753 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EPHB3P54753 HSPA8P4-201ENST00000511877 1920 ntBASIC4.33□□□□□ -1.72
EPHB3P54753 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHB3P54753 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms