Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL359704.1-201ENST00000411586 781 ntBASIC2.55□□□□□ -2
HDAC3O15379 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 EEF1A1P41-201ENST00000414667 207 ntBASIC2.55□□□□□ -2
HDAC3O15379 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
HDAC3O15379 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.55□□□□□ -2
HDAC3O15379 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 USP9YP28-201ENST00000435142 589 ntBASIC2.55□□□□□ -2
HDAC3O15379 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.55□□□□□ -2
HDAC3O15379 CYCSP32-201ENST00000440548 321 ntBASIC2.55□□□□□ -2
HDAC3O15379 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 SSXP1-201ENST00000453640 473 ntBASIC2.55□□□□□ -2
HDAC3O15379 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 SNORD121B-201ENST00000458838 81 ntBASIC2.55□□□□□ -2
HDAC3O15379 AC113155.1-201ENST00000511141 769 ntBASIC2.55□□□□□ -2
HDAC3O15379 RNA5SP341-201ENST00000516261 117 ntBASIC2.55□□□□□ -2
HDAC3O15379 RNU6-405P-201ENST00000516637 110 ntBASIC2.55□□□□□ -2
HDAC3O15379 RNA5SP471-201ENST00000516971 106 ntBASIC2.55□□□□□ -2
HDAC3O15379 AC109329.2-201ENST00000519658 482 ntBASIC2.55□□□□□ -2
HDAC3O15379 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.55□□□□□ -2
HDAC3O15379 OR4R1P-201ENST00000529879 463 ntBASIC2.55□□□□□ -2
HDAC3O15379 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDAC3O15379 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.55□□□□□ -2
HDAC3O15379 CR383656.7-201ENST00000548164 174 ntBASIC2.55□□□□□ -2
HDAC3O15379 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
HDAC3O15379 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.55□□□□□ -2
HDAC3O15379 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.55□□□□□ -2
HDAC3O15379 AC060771.1-201ENST00000582031 164 ntBASIC2.55□□□□□ -2
HDAC3O15379 AC009977.1-201ENST00000586015 570 ntBASIC2.55□□□□□ -2
HDAC3O15379 HMGN1P30-201ENST00000589286 268 ntBASIC2.55□□□□□ -2
HDAC3O15379 TPMTP1-201ENST00000592307 737 ntBASIC2.55□□□□□ -2
HDAC3O15379 SEPT7P9-203ENST00000604116 343 ntBASIC2.55□□□□□ -2
HDAC3O15379 AL136363.2-201ENST00000604173 851 ntBASIC2.55□□□□□ -2
HDAC3O15379 AC013476.2-201ENST00000614456 459 ntBASIC2.55□□□□□ -2
HDAC3O15379 AC068792.1-201ENST00000621354 417 ntBASIC2.55□□□□□ -2
HDAC3O15379 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
HDAC3O15379 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.54□□□□□ -2
HDAC3O15379 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HDAC3O15379 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
HDAC3O15379 MIR128-1-201ENST00000384921 82 ntBASIC2.54□□□□□ -2
HDAC3O15379 MIR483-201ENST00000385070 76 ntBASIC2.54□□□□□ -2
HDAC3O15379 MIR524-201ENST00000385242 87 ntBASIC2.54□□□□□ -2
HDAC3O15379 SNORA40.3-201ENST00000390964 122 ntBASIC2.54□□□□□ -2
HDAC3O15379 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
HDAC3O15379 AF274854.1-201ENST00000413236 615 ntBASIC2.54□□□□□ -2
HDAC3O15379 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.54□□□□□ -2
HDAC3O15379 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.54□□□□□ -2
HDAC3O15379 RPL7P37-201ENST00000425095 738 ntBASIC2.54□□□□□ -2
HDAC3O15379 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.54□□□□□ -2
HDAC3O15379 OR4K11P-201ENST00000431829 904 ntBASIC2.54□□□□□ -2
HDAC3O15379 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.54□□□□□ -2
HDAC3O15379 PGBD4P3-201ENST00000440731 581 ntBASIC2.54□□□□□ -2
HDAC3O15379 AL049734.2-201ENST00000441066 616 ntBASIC2.54□□□□□ -2
HDAC3O15379 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.54□□□□□ -2
HDAC3O15379 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.54□□□□□ -2
HDAC3O15379 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.54□□□□□ -2
HDAC3O15379 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.54□□□□□ -2
HDAC3O15379 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.54□□□□□ -2
HDAC3O15379 RNU6-1095P-201ENST00000516148 108 ntBASIC2.54□□□□□ -2
HDAC3O15379 RNU6-720P-201ENST00000516363 108 ntBASIC2.54□□□□□ -2
HDAC3O15379 AC022616.6-201ENST00000520479 119 ntBASIC2.54□□□□□ -2
HDAC3O15379 SUB1P1-201ENST00000524415 382 ntBASIC2.54□□□□□ -2
HDAC3O15379 AP003181.2-201ENST00000528941 181 ntBASIC2.54□□□□□ -2
HDAC3O15379 OR5BN1P-201ENST00000532955 829 ntBASIC2.54□□□□□ -2
HDAC3O15379 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.54□□□□□ -2
HDAC3O15379 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.54□□□□□ -2
HDAC3O15379 MYL12BP1-201ENST00000569826 507 ntBASIC2.54□□□□□ -2
HDAC3O15379 MIR3913-1-201ENST00000577744 102 ntBASIC2.54□□□□□ -2
HDAC3O15379 AC005771.1-201ENST00000585581 349 ntBASIC2.54□□□□□ -2
HDAC3O15379 AP001429.1-201ENST00000602568 530 ntBASIC2.54□□□□□ -2
HDAC3O15379 AC080078.2-201ENST00000603766 501 ntBASIC2.54□□□□□ -2
HDAC3O15379 HSPE1P7-201ENST00000604681 321 ntBASIC2.54□□□□□ -2
HDAC3O15379 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.54□□□□□ -2
HDAC3O15379 AC011890.2-201ENST00000613393 294 ntBASIC2.54□□□□□ -2
HDAC3O15379 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.54□□□□□ -2
HDAC3O15379 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
HDAC3O15379 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.54□□□□□ -2
HDAC3O15379 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
HDAC3O15379 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HDAC3O15379 SNORA18.3-201ENST00000384122 132 ntBASIC2.53□□□□□ -2
HDAC3O15379 U3.20-201ENST00000390909 217 ntBASIC2.53□□□□□ -2
HDAC3O15379 SNORA48.2-201ENST00000390926 124 ntBASIC2.53□□□□□ -2
HDAC3O15379 SNORD115.1-201ENST00000391109 76 ntBASIC2.53□□□□□ -2
HDAC3O15379 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 AC010975.2-201ENST00000427781 588 ntBASIC2.53□□□□□ -2
HDAC3O15379 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 TPT1P14-201ENST00000448018 505 ntBASIC2.53□□□□□ -2
HDAC3O15379 NANOGNBP1-201ENST00000448444 480 ntBASIC2.53□□□□□ -2
HDAC3O15379 SNRPGP6-201ENST00000451124 220 ntBASIC2.53□□□□□ -2
HDAC3O15379 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 SNORD42A-201ENST00000459584 64 ntBASIC2.53□□□□□ -2
HDAC3O15379 RPL23AP70-201ENST00000483361 460 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC055855.1-201ENST00000489563 579 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC112204.1-201ENST00000502591 103 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms