Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC078899.3-201ENST00000599065 212 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EPHB3P54753 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AC010615.1-201ENST00000594254 1764 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
EPHB3P54753 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.42□□□□□ -1.7
EPHB3P54753 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHB3P54753 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHB3P54753 RLIMP1-201ENST00000339626 1680 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHB3P54753 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EPHB3P54753 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
EPHB3P54753 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
EPHB3P54753 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHB3P54753 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EPHB3P54753 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.41□□□□□ -1.7
EPHB3P54753 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHB3P54753 Y_RNA.60-201ENST00000362831 98 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RNA5SP22-201ENST00000365393 109 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
EPHB3P54753 RNU6-434P-201ENST00000384376 107 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 Y_RNA.515-201ENST00000384535 112 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 Y_RNA.518-201ENST00000384552 113 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RNU6-306P-201ENST00000384617 107 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 Y_RNA.562-201ENST00000384695 113 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RNU6-33P-201ENST00000384793 107 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 MIR134-201ENST00000385258 73 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RNU11-4P-201ENST00000391149 133 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RNU6-754P-201ENST00000391166 107 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 MIR548M-201ENST00000408260 86 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 MIR1179-201ENST00000408703 91 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RNU6-516P-201ENST00000411381 104 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.41□□□□□ -1.7
EPHB3P54753 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 CYCSP10-201ENST00000417973 294 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RPL21P109-201ENST00000422213 475 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 RPL7P2-201ENST00000427639 268 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL359672.1-201ENST00000442302 409 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.41□□□□□ -1.7
EPHB3P54753 AC022034.3-201ENST00000471393 478 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AC114801.2-201ENST00000503825 781 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.41□□□□□ -1.7
EPHB3P54753 AC096745.1-201ENST00000509945 370 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 RNU6-323P-201ENST00000521915 107 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 IGHV3-76-201ENST00000522465 295 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AC026371.1-201ENST00000551867 419 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 HSBP1P1-201ENST00000555205 166 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.41□□□□□ -1.7
EPHB3P54753 MIR3128-201ENST00000581957 66 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL670379.6-201ENST00000603753 252 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AC008162.1-201ENST00000604718 254 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL670379.1-201ENST00000604752 252 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 IGHV3-29-201ENST00000604817 344 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL670379.5-201ENST00000605253 252 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL670379.8-201ENST00000605353 252 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AL670379.7-201ENST00000605823 252 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 LINC00901.1-201ENST00000617252 152 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 AC092435.4-201ENST00000623012 4159 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHB3P54753 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHB3P54753 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
EPHB3P54753 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.41□□□□□ -1.7
EPHB3P54753 LINC01355-201ENST00000566551 5444 ntBASIC4.41□□□□□ -1.7
EPHB3P54753 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHB3P54753 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
EPHB3P54753 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.4□□□□□ -1.7
EPHB3P54753 Z82217.1-201ENST00000625157 8149 ntBASIC4.4□□□□□ -1.7
EPHB3P54753 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
EPHB3P54753 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.7
EPHB3P54753 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
EPHB3P54753 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.4□□□□□ -1.7
EPHB3P54753 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.4□□□□□ -1.7
EPHB3P54753 Y_RNA.2-201ENST00000362330 96 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 SMIM11P1-201ENST00000369586 178 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 RNU6-946P-201ENST00000383878 107 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 MT-TW-201ENST00000387382 68 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 RNU6-293P-201ENST00000411259 106 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.4□□□□□ -1.71
EPHB3P54753 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.4□□□□□ -1.71
EPHB3P54753 AC011816.1-201ENST00000441346 546 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 AC087884.1-201ENST00000469738 328 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 AC104164.2-201ENST00000496953 495 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.4□□□□□ -1.71
EPHB3P54753 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
EPHB3P54753 OR5D17P-201ENST00000531492 978 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 AC022655.2-201ENST00000577280 318 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.4□□□□□ -1.71
EPHB3P54753 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.4□□□□□ -1.71
EPHB3P54753 HMGB1P50-201ENST00000605814 607 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 MIR6875-201ENST00000617506 72 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 AL138825.1-201ENST00000618587 192 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 AC034229.5-201ENST00000624258 185 ntBASIC4.4□□□□□ -1.71
EPHB3P54753 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms