Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AP001596.2-201ENST00000608410 312 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AL162274.2-201ENST00000614406 332 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AP001506.1-201ENST00000615444 211 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC027309.3-201ENST00000623419 351 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC093831.2-201ENST00000624393 3427 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
DDX43Q9NXZ2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 MIR422A-201ENST00000362286 90 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 SNORA14A-201ENST00000364773 135 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 SNORA36C-201ENST00000384289 132 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RNU6-114P-201ENST00000384704 105 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 SNORD15B-201ENST00000384714 146 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 MIR181A1-201ENST00000385026 110 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 MIR634-201ENST00000385208 97 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 SNORD115.1-201ENST00000391109 76 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RPS3AP3-201ENST00000411933 242 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 HSPE1P1-201ENST00000421494 318 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 NDUFB4P7-201ENST00000423198 363 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AL590383.1-201ENST00000428602 75 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC009961.2-201ENST00000435771 251 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 MTND6P13-201ENST00000443510 523 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RPL7P36-201ENST00000444633 681 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AL590365.1-201ENST00000450788 243 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 OR6K1P-201ENST00000456766 971 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RPL27AP5-201ENST00000469428 449 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 GMPSP1-201ENST00000514075 579 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RNU6-798P-201ENST00000516912 103 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RPS3AP4-201ENST00000555161 764 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 HSPE1P7-201ENST00000604681 321 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 U1.23-201ENST00000610293 146 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 RNU1-68P-201ENST00000615382 146 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC007014.2-201ENST00000615581 479 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC072046.2-201ENST00000618366 268 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 U1.39-201ENST00000621562 146 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC009268.2-201ENST00000621925 457 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DDX43Q9NXZ2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 Y_RNA.256-201ENST00000364594 104 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 Y_RNA.303-201ENST00000364998 94 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 RNU6-533P-201ENST00000384144 107 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 RNU6-809P-201ENST00000384461 107 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 BTF3P7-201ENST00000407097 488 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 Z92545.1-201ENST00000411782 234 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 RPL30P16-201ENST00000419341 429 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 OR2AS1P-201ENST00000427827 319 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC092573.2-201ENST00000434546 243 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 UBE2V1P13-201ENST00000436983 439 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC016696.1-201ENST00000446949 318 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 GAPDHP17-201ENST00000449858 1001 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC027673.1-201ENST00000456245 405 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 snoU109.1-201ENST00000459339 135 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 RPS29P2-201ENST00000479278 136 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AL049874.1-201ENST00000489560 388 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC106872.3-201ENST00000495104 446 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC108078.1-201ENST00000508073 725 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 NDUFB4P2-201ENST00000509515 391 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC006445.2-201ENST00000510061 472 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC034159.1-201ENST00000513885 583 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC008885.1-201ENST00000514930 301 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 CASP1P1-201ENST00000526345 212 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC068135.2-201ENST00000569293 1028 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 MTCO3P24-201ENST00000572729 782 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC011471.1-201ENST00000585766 187 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms