Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC092470.1-201ENST00000546187 132 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.44□□□□□ -1.7
EPHB3P54753 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.44□□□□□ -1.7
EPHB3P54753 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.44□□□□□ -1.7
EPHB3P54753 MIR4286-201ENST00000580651 93 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.44□□□□□ -1.7
EPHB3P54753 AC125232.2-201ENST00000592457 143 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.44□□□□□ -1.7
EPHB3P54753 AC015967.1-201ENST00000619893 476 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
EPHB3P54753 SCN1A-220ENST00000641603 12506 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EPHB3P54753 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
EPHB3P54753 AL122126.1-201ENST00000546905 1318 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 GABPAP-201ENST00000419271 1356 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EPHB3P54753 EOGT-210ENST00000615922 1931 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
EPHB3P54753 U3.29-201ENST00000391296 212 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 RNU2-21P-201ENST00000410368 188 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.43□□□□□ -1.7
EPHB3P54753 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.43□□□□□ -1.7
EPHB3P54753 AC093106.2-201ENST00000428212 385 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 AC127537.2-201ENST00000439258 465 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AL353752.1-201ENST00000454946 260 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AL445433.1-201ENST00000457507 257 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 RNA5SP246-201ENST00000458909 119 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 AC012158.1-204ENST00000483430 465 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 RN7SL432P-201ENST00000484057 298 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 RN7SL604P-201ENST00000492589 296 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AC135721.1-201ENST00000497954 479 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.43□□□□□ -1.7
EPHB3P54753 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EPHB3P54753 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 RNU2-69P-201ENST00000516061 100 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 RNU6-1023P-201ENST00000516137 106 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 RNU6-789P-201ENST00000517105 102 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.43□□□□□ -1.7
EPHB3P54753 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 SUB1P3-201ENST00000564581 315 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AC006254.3-201ENST00000603353 884 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AL138889.2-201ENST00000603883 242 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 AL161423.1-201ENST00000613700 262 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 NEAT1-202ENST00000501122 22743 ntBASIC4.43□□□□□ -1.7
EPHB3P54753 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
EPHB3P54753 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHB3P54753 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EPHB3P54753 AL137003.2-201ENST00000606924 2538 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 Z73965.1-201ENST00000623412 2297 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EPHB3P54753 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHB3P54753 XIAPP3-201ENST00000312918 795 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.42□□□□□ -1.7
EPHB3P54753 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 RNU6-432P-201ENST00000384196 109 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 RNU6-393P-201ENST00000384475 107 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 SNORD66.1-201ENST00000391230 76 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AL109755.1-201ENST00000401791 649 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.42□□□□□ -1.7
EPHB3P54753 RPL21P65-201ENST00000406094 466 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 RBMY1KP-201ENST00000423480 476 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 MRPS18CP6-201ENST00000423587 223 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 USP9YP30-201ENST00000430729 455 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 MRPS18BP2-201ENST00000434310 759 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 Z95327.1-201ENST00000446082 482 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.42□□□□□ -1.7
EPHB3P54753 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.42□□□□□ -1.7
EPHB3P54753 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 MTND1P19-201ENST00000511780 315 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.42□□□□□ -1.7
EPHB3P54753 Y_RNA.715-201ENST00000517082 110 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AC090151.1-201ENST00000520784 730 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 CYCSP27-201ENST00000527643 293 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AP000889.1-201ENST00000530968 660 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHB3P54753 HMGB3P26-201ENST00000560051 582 ntBASIC4.42□□□□□ -1.7
EPHB3P54753 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.42□□□□□ -1.7
EPHB3P54753 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms