Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC087883.1-201ENST00000551882 391 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AL133241.1-201ENST00000556832 487 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 MIR5697-201ENST00000578045 78 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC098614.4-201ENST00000607601 462 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC090517.2-201ENST00000614966 680 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC007496.3-201ENST00000624987 3443 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC008568.2-201ENST00000623862 2313 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 Y_RNA.248-201ENST00000364501 109 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 RN7SKP226-201ENST00000364912 300 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 RNU5E-5P-201ENST00000365379 116 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 RNU6-1207P-201ENST00000384343 107 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 SNORA1.3-201ENST00000384676 136 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 HMGB1P11-201ENST00000413899 637 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AL353705.1-201ENST00000433468 480 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 HMGB3P11-201ENST00000440127 604 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 RPL30P14-201ENST00000482744 348 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC093809.1-201ENST00000509155 340 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC091133.4-201ENST00000511142 308 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 ZNF519P3-201ENST00000557158 1032 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 SEPT7P9-203ENST00000604116 343 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 BCRP9-201ENST00000605312 388 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AL158211.4-201ENST00000606988 584 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC109347.2-201ENST00000610220 349 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 SNORA50A-202ENST00000629536 136 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 AC005183.1-201ENST00000603687 1979 ntBASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX43Q9NXZ2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
DDX43Q9NXZ2 U3.11-201ENST00000364476 212 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 RNU6-76P-201ENST00000384060 104 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 RNA5SP38-201ENST00000410750 119 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC083875.1-201ENST00000419509 405 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL356583.2-201ENST00000426536 280 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL445669.1-201ENST00000426743 755 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 RPL37P21-201ENST00000435890 276 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC090774.1-201ENST00000435925 246 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 NDUFB4P6-201ENST00000436819 366 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 UBE2V1P8-201ENST00000437166 265 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 PGBD4P3-201ENST00000440731 581 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL831737.1-201ENST00000441288 271 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL590664.1-201ENST00000448065 339 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 Z99127.3-201ENST00000448158 395 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 PAXBP1P1-201ENST00000449315 447 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC104308.1-201ENST00000454621 333 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 KLF3P2-201ENST00000465138 268 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AL049714.1-201ENST00000466686 347 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC021382.1-201ENST00000483523 359 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 RN7SL283P-201ENST00000489055 303 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 MTAPP1-201ENST00000489154 819 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC105252.1-201ENST00000503089 286 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 RN7SKP298-201ENST00000515950 94 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 SNORD59.2-201ENST00000516873 68 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms