Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 UBE2D3P2-201ENST00000424409 445 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 RPL21P66-201ENST00000426566 466 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 USP9YP30-201ENST00000430729 455 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AL445584.1-201ENST00000431451 330 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC073587.1-201ENST00000447093 876 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 HMGN2P21-201ENST00000447764 270 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AP003122.3-201ENST00000526316 255 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC084851.1-201ENST00000529105 249 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC010653.1-201ENST00000571108 881 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 RN7SL600P-201ENST00000581811 299 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC011494.1-201ENST00000596454 237 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AL591516.1-201ENST00000611326 274 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC140134.1-201ENST00000511830 3544 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.5-201ENST00000362334 102 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.148-201ENST00000363557 117 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.364-201ENST00000365532 101 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.404-201ENST00000383978 102 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 RNU6-790P-201ENST00000384479 105 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 MIR634-201ENST00000385208 97 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 MRPL42P3-201ENST00000401492 326 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC138761.5-201ENST00000433967 325 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 DAP3P1-201ENST00000441522 278 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 RANP8-201ENST00000444720 713 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC023141.12-201ENST00000512399 199 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 SNORD116.3-201ENST00000517176 78 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC104576.1-201ENST00000524225 88 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC091516.1-201ENST00000549191 703 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 TRAV37-201ENST00000553906 342 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 MIR3200-201ENST00000580767 85 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 SNORA51-201ENST00000606420 132 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC084757.4-201ENST00000616350 526 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC116096.1-201ENST00000566804 2314 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 PNPT1P2-201ENST00000456768 2050 ntBASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.35□□□□□ -1.55
TMEM88BA6NKF7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC063976.2-201ENST00000425667 3556 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 RNA5SP119-201ENST00000362715 117 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.111-201ENST00000363248 100 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 SNORA70.6-201ENST00000383934 134 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 RNU2-3P-201ENST00000410144 191 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 RNU2-33P-201ENST00000410344 192 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC007919.1-201ENST00000429380 217 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC099670.2-201ENST00000435130 321 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 NOTCH2P1-201ENST00000443481 624 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 RN7SL197P-201ENST00000466981 299 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC008571.1-201ENST00000467232 300 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 ACA59.1-201ENST00000515966 143 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 Vault.1-201ENST00000516474 102 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC007991.1-201ENST00000522680 631 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 FKBP1BP1-201ENST00000553366 325 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 SRGNP1-201ENST00000603392 451 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AC007938.3-201ENST00000604965 623 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 uc_338.13-201ENST00000618243 179 ntBASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.34□□□□□ -1.55
TMEM88BA6NKF7 AL359693.1-201ENST00000614959 2407 ntBASIC5.34□□□□□ -1.56
TMEM88BA6NKF7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TMEM88BA6NKF7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.34□□□□□ -1.56
TMEM88BA6NKF7 AL161912.2-201ENST00000565707 3007 ntBASIC5.34□□□□□ -1.56
TMEM88BA6NKF7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TMEM88BA6NKF7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms