Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AP005435.4-201ENST00000529514 284 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 OR5AL2P-201ENST00000532185 920 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC093027.1-201ENST00000546698 429 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC037471.2-201ENST00000564941 598 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.09□□□□□ -1.75
PNKPQ96T60 MIR4738-201ENST00000579134 87 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 MIR4775-201ENST00000581168 75 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.09□□□□□ -1.75
PNKPQ96T60 VN1R80P-201ENST00000597126 338 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC008739.3-201ENST00000603262 127 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AL132765.2-201ENST00000610812 351 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC079684.1-201ENST00000621405 437 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC012442.3-202ENST00000636742 206 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PNKPQ96T60 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PNKPQ96T60 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
PNKPQ96T60 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PNKPQ96T60 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PNKPQ96T60 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
PNKPQ96T60 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.08□□□□□ -1.76
PNKPQ96T60 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PNKPQ96T60 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PNKPQ96T60 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PNKPQ96T60 RNU6-283P-201ENST00000364788 107 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.08□□□□□ -1.76
PNKPQ96T60 MIR153-1-201ENST00000384914 90 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 Y_RNA.615-201ENST00000410769 117 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.08□□□□□ -1.76
PNKPQ96T60 AC114491.1-201ENST00000416095 246 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.08□□□□□ -1.76
PNKPQ96T60 AC093106.2-201ENST00000428212 385 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PNKPQ96T60 RPL35AP22-201ENST00000436855 335 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PNKPQ96T60 NOTCH2P1-201ENST00000443481 624 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AL590399.6-201ENST00000446396 307 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 MRPL50P4-201ENST00000446432 475 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 MRPS31P2-201ENST00000451581 518 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 IFNWP4-201ENST00000453148 294 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 HMGN2P26-201ENST00000463169 339 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PNKPQ96T60 RNU4-29P-201ENST00000515943 174 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 TRMT10BP1-201ENST00000519377 943 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.08□□□□□ -1.76
PNKPQ96T60 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.08□□□□□ -1.76
PNKPQ96T60 AC078814.3-201ENST00000553036 491 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AC068446.3-201ENST00000555285 382 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.08□□□□□ -1.76
PNKPQ96T60 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.08□□□□□ -1.76
PNKPQ96T60 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.08□□□□□ -1.76
PNKPQ96T60 AC012669.1-201ENST00000603209 283 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AC091167.4-201ENST00000605079 184 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.08□□□□□ -1.76
PNKPQ96T60 RMST_8.1-201ENST00000610287 165 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AC093838.1-201ENST00000613014 469 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AL391261.4-201ENST00000616012 481 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.08□□□□□ -1.76
PNKPQ96T60 FP236240.3-201ENST00000623061 327 ntBASIC4.08□□□□□ -1.76
PNKPQ96T60 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PNKPQ96T60 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PNKPQ96T60 AC004972.1-201ENST00000623934 2209 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PNKPQ96T60 MAPK10-372ENST00000641954 3413 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.07□□□□□ -1.76
PNKPQ96T60 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PNKPQ96T60 MTND4P35-201ENST00000604257 1375 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNU6-552P-201ENST00000362869 119 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNA5SP399-201ENST00000364003 117 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNU5E-6P-201ENST00000365574 115 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 XGY1-201ENST00000381172 446 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNU6-1029P-201ENST00000384109 107 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNU6-754P-201ENST00000391166 107 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNU6-903P-201ENST00000391270 109 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.07□□□□□ -1.76
PNKPQ96T60 RN7SKP156-201ENST00000410308 342 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 UBE2FP1-201ENST00000416536 447 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.07□□□□□ -1.76
PNKPQ96T60 MTCO3P46-201ENST00000425787 232 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AL365400.1-201ENST00000431854 640 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 CKS1BP5-201ENST00000434172 273 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 MRPS18BP2-201ENST00000434310 759 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.07□□□□□ -1.76
PNKPQ96T60 AC234775.1-201ENST00000454247 670 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AL162395.1-201ENST00000457882 422 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 PPIAP15-201ENST00000479662 484 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AC103851.1-201ENST00000506833 274 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AC026784.1-201ENST00000507986 352 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.07□□□□□ -1.76
PNKPQ96T60 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.07□□□□□ -1.76
PNKPQ96T60 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms