Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 MTND4LP20-201ENST00000402379 270 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL356057.2-201ENST00000403318 432 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 ZNF885P-201ENST00000420174 1098 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC007742.1-201ENST00000425789 329 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 ELOCP26-201ENST00000436067 329 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL353706.1-201ENST00000436728 494 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 ST13P20-201ENST00000447996 1065 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 ARPC3P5-201ENST00000448802 534 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.71□□□□□ -1.98
HDAC3O15379 BX510359.1-201ENST00000456973 237 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC006445.1-201ENST00000491925 405 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC010424.1-201ENST00000506336 297 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 MTCO3P7-201ENST00000510008 774 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC008716.1-201ENST00000511084 513 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC022447.1-201ENST00000515358 464 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 SNORA31.8-201ENST00000516327 108 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC009812.2-201ENST00000517657 457 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC3O15379 AC024224.1-201ENST00000538284 609 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.71□□□□□ -1.98
HDAC3O15379 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 AP005205.1-201ENST00000563503 508 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC064872.1-201ENST00000604823 1072 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC128687.1-201ENST00000605304 619 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 BCRP9-201ENST00000605312 388 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL390208.1-201ENST00000605885 644 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC092354.1-201ENST00000606057 376 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 RN7SKP299-201ENST00000606679 301 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC103591.3-201ENST00000608684 209 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL161734.1-201ENST00000609720 557 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC073968.1-201ENST00000618594 637 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC008443.7-201ENST00000622195 246 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC004009.2-201ENST00000623016 728 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.71□□□□□ -1.98
HDAC3O15379 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HDAC3O15379 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.71□□□□□ -1.98
HDAC3O15379 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC3O15379 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC3O15379 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
HDAC3O15379 RNU5F-6P-201ENST00000362979 116 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AL031679.1-201ENST00000400616 525 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC083875.1-201ENST00000419509 405 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC3O15379 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.7□□□□□ -1.98
HDAC3O15379 AL590233.1-201ENST00000430017 456 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.7□□□□□ -1.98
HDAC3O15379 RPL23AP74-201ENST00000437246 471 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 MTCO1P19-201ENST00000443487 500 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC234775.1-201ENST00000454247 670 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 MTCO2P18-201ENST00000457151 658 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 RN7SL504P-201ENST00000494496 287 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC117522.3-201ENST00000507974 584 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC093809.1-201ENST00000509155 340 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC091965.2-201ENST00000512324 613 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC3O15379 Y_RNA.695-201ENST00000516715 107 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC013828.2-201ENST00000532487 235 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC024909.2-201ENST00000553035 286 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AP001004.1-201ENST00000582468 324 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC3O15379 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC073544.2-201ENST00000601155 540 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC3O15379 AL049779.4-201ENST00000604500 156 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC097468.3-201ENST00000607956 456 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC239868.4-201ENST00000608318 671 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.7□□□□□ -1.98
HDAC3O15379 AC040168.1-201ENST00000623594 991 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 AC098679.4-201ENST00000624241 654 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.7□□□□□ -1.98
HDAC3O15379 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.7□□□□□ -1.98
HDAC3O15379 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
HDAC3O15379 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
HDAC3O15379 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.69□□□□□ -1.98
HDAC3O15379 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HDAC3O15379 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms