Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-708P-201ENST00000384217 107 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 RNU6-700P-201ENST00000391043 107 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AL603910.2-201ENST00000407268 136 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.07□□□□□ -1.6
NFKB1P19838 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.07□□□□□ -1.6
NFKB1P19838 AL159987.2-201ENST00000432754 307 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC092573.2-201ENST00000434546 243 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 RPS11P1-201ENST00000451072 473 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 RN7SL799P-201ENST00000475891 298 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 RN7SL727P-201ENST00000482164 296 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC008716.1-201ENST00000511084 513 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC007016.1-201ENST00000512110 244 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 RNU6-840P-201ENST00000517275 65 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 IGKV2-23-201ENST00000518729 323 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AP006245.2-201ENST00000522004 300 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AMZ2P1-203ENST00000565833 850 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.07□□□□□ -1.6
NFKB1P19838 MIR4691-201ENST00000583764 85 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC006116.3-201ENST00000592968 361 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.07□□□□□ -1.6
NFKB1P19838 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 AC127459.3-201ENST00000624328 466 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.07□□□□□ -1.6
NFKB1P19838 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.07□□□□□ -1.6
NFKB1P19838 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NFKB1P19838 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NFKB1P19838 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.06□□□□□ -1.6
NFKB1P19838 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.06□□□□□ -1.6
NFKB1P19838 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 AL049555.1-201ENST00000562834 1933 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NFKB1P19838 RNU6-595P-201ENST00000363944 107 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NFKB1P19838 MIR215-201ENST00000384858 110 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NFKB1P19838 AL139156.1-201ENST00000412785 841 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.06□□□□□ -1.6
NFKB1P19838 AL163193.1-201ENST00000444895 788 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.06□□□□□ -1.6
NFKB1P19838 BTF3P6-201ENST00000448054 499 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 RPL37P6-202ENST00000464216 403 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 AC133134.1-201ENST00000466800 359 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 OR51K1P-201ENST00000510214 950 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 AC067942.3-201ENST00000512025 362 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 RPL23AP53-201ENST00000521854 457 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 AC005868.1-201ENST00000536421 331 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.06□□□□□ -1.6
NFKB1P19838 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.06□□□□□ -1.6
NFKB1P19838 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.06□□□□□ -1.6
NFKB1P19838 MIR5696-201ENST00000578474 85 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 MIR4716-201ENST00000579628 84 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 AC123912.5-201ENST00000605470 343 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 SNORD91B-202ENST00000608459 222 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 RMST_4.1-201ENST00000616886 107 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 FAM91A3P-201ENST00000456826 2544 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 C4BPAP1-201ENST00000415474 1893 ntBASIC5.06□□□□□ -1.6
NFKB1P19838 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.06□□□□□ -1.6
NFKB1P19838 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
NFKB1P19838 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
NFKB1P19838 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NFKB1P19838 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NFKB1P19838 STX3-208ENST00000641815 3236 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NFKB1P19838 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NFKB1P19838 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NFKB1P19838 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.05□□□□□ -1.6
NFKB1P19838 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NFKB1P19838 Y_RNA.65-201ENST00000362846 100 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 RNA5SP428-201ENST00000365129 132 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 RNU6-187P-201ENST00000384139 106 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NFKB1P19838 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NFKB1P19838 CTSL3P-202ENST00000412179 788 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.05□□□□□ -1.6
NFKB1P19838 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.05□□□□□ -1.6
NFKB1P19838 RPS27AP12-201ENST00000429552 465 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 GEMIN8P3-201ENST00000445417 720 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms