Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 OR5H5P-201ENST00000503164 928 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.77□□□□□ -1.97
HDAC3O15379 AC093767.1-201ENST00000504523 156 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.77□□□□□ -1.97
HDAC3O15379 MTND5P13-201ENST00000513046 1079 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC060788.1-201ENST00000521318 469 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.77□□□□□ -1.97
HDAC3O15379 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.77□□□□□ -1.97
HDAC3O15379 AC007115.1-201ENST00000546853 234 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.77□□□□□ -1.97
HDAC3O15379 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HDAC3O15379 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.77□□□□□ -1.97
HDAC3O15379 HSPE1P3-201ENST00000559254 309 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 ROCK1P1-201ENST00000573767 549 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 VN1R92P-201ENST00000598511 928 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 BNIP3P11-201ENST00000603878 563 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL360181.4-201ENST00000621752 134 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 Z69908.1-201ENST00000622603 247 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL356266.1-201ENST00000623311 483 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL356596.1-201ENST00000624230 379 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC099063.3-201ENST00000642066 185 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
HDAC3O15379 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HDAC3O15379 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HDAC3O15379 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HDAC3O15379 AC092593.1-201ENST00000515413 1815 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 ZNF833P-201ENST00000424938 1494 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HDAC3O15379 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.77□□□□□ -1.97
HDAC3O15379 AL022578.1-201ENST00000439330 1433 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 MTND4P16-201ENST00000466108 1367 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.76□□□□□ -1.97
HDAC3O15379 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.76□□□□□ -1.97
HDAC3O15379 AL672167.1-206ENST00000356293 943 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 SNORA71.1-201ENST00000364523 117 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 SNORA70.4-201ENST00000365509 134 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 SNORD82-201ENST00000365530 70 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 MT-TC-201ENST00000387405 66 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 RNU6-952P-201ENST00000391164 108 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 HMGB1P17-201ENST00000403495 628 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 TPMTP3-201ENST00000411928 735 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.76□□□□□ -1.97
HDAC3O15379 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.76□□□□□ -1.97
HDAC3O15379 FNDC3CP-201ENST00000420795 1155 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AL035407.1-201ENST00000429211 571 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.76□□□□□ -1.97
HDAC3O15379 AC127537.2-201ENST00000439258 465 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AP000936.2-201ENST00000447151 681 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 RPL37P4-201ENST00000448908 268 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC005297.2-201ENST00000450430 606 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.76□□□□□ -1.97
HDAC3O15379 USP9YP34-201ENST00000453983 808 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 RPL27AP5-201ENST00000469428 449 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 RAP1BP2-201ENST00000478270 544 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HDAC3O15379 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.76□□□□□ -1.97
HDAC3O15379 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.76□□□□□ -1.97
HDAC3O15379 RNU6-678P-201ENST00000516832 109 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC087276.1-201ENST00000529659 480 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AL133271.1-201ENST00000538229 291 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.76□□□□□ -1.97
HDAC3O15379 AC007954.1-201ENST00000554198 494 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC136618.2-201ENST00000575091 400 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 MIR4446-201ENST00000578505 67 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.76□□□□□ -1.97
HDAC3O15379 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.76□□□□□ -1.97
HDAC3O15379 NBR2-204ENST00000587322 63 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AL590229.1-201ENST00000603497 542 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC005046.1-201ENST00000608515 625 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AL159169.3-201ENST00000608871 561 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC073114.1-201ENST00000612027 490 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 MIR7112-201ENST00000616126 65 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.76□□□□□ -1.97
HDAC3O15379 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.76□□□□□ -1.97
HDAC3O15379 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.76□□□□□ -1.97
HDAC3O15379 AL079343.1-201ENST00000572358 1771 ntBASIC2.76□□□□□ -1.97
HDAC3O15379 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HDAC3O15379 DDX43P2-201ENST00000604753 1354 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
HDAC3O15379 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC3O15379 MIR26A1-201ENST00000362205 77 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 RNU6-989P-201ENST00000362756 107 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 RNA5SP267-201ENST00000364893 126 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 RNA5SP88-201ENST00000365560 109 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 SNORD21-201ENST00000383953 95 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 RNU6-723P-201ENST00000383973 107 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 RNU6-339P-201ENST00000384310 107 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 MT-TH-201ENST00000387441 69 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 SNORA26.8-201ENST00000391306 124 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AL512633.1-201ENST00000399931 655 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC3O15379 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC3O15379 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.75□□□□□ -1.97
HDAC3O15379 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.75□□□□□ -1.97
HDAC3O15379 TPMTP2-201ENST00000414372 726 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.75□□□□□ -1.97
HDAC3O15379 AC006946.1-201ENST00000429106 328 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC244035.1-201ENST00000430042 390 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 232.7 ms