Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR514A1-201ENST00000385133 98 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AL035079.1-201ENST00000405210 287 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AC063979.1-201ENST00000415539 377 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AL590399.2-201ENST00000427536 309 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AL590383.1-201ENST00000428602 75 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AC073063.1-201ENST00000434352 607 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 SCARNA10-201ENST00000459255 330 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 APOOP4-201ENST00000513530 597 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AC025423.5-201ENST00000550230 219 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 RNU6-371P-201ENST00000364283 108 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 SNORA22B-201ENST00000383876 138 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 RNU6-1040P-201ENST00000383974 107 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 RNU6-310P-201ENST00000384655 107 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AL117339.2-201ENST00000430475 180 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC079168.2-201ENST00000453977 416 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 RPL5P30-201ENST00000465511 891 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 RPL36AP41-201ENST00000493820 306 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC097473.1-201ENST00000508142 408 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC008716.1-201ENST00000511084 513 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AL160281.1-201ENST00000605307 311 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC008121.3-201ENST00000618726 433 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC112484.5-201ENST00000624189 228 ntBASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.51□□□□□ -1.53
TMEM88BA6NKF7 AC007823.1-201ENST00000569932 1566 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 ZNF285B-201ENST00000561698 1767 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC004817.4-201ENST00000602396 3625 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 OR51H2P-202ENST00000641424 3046 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 MIR383-201ENST00000362257 73 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 SNORD62.1-201ENST00000362541 86 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 RNU6-629P-201ENST00000384061 103 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 Y_RNA.534-201ENST00000384599 112 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 Z98745.1-201ENST00000402553 494 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 RPS15AP6-201ENST00000420703 385 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 RPL31P12-201ENST00000422587 358 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 RPL27AP8-201ENST00000424277 446 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC079780.1-201ENST00000428259 207 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AL645568.3-201ENST00000433683 316 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 MTCO3P10-201ENST00000455912 772 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 snoU13.29-201ENST00000459370 104 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC084198.1-201ENST00000477747 402 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 SNORA74C-1-201ENST00000580726 201 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC008737.2-201ENST00000599446 118 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AL078596.1-201ENST00000624856 447 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 OR4G2P-202ENST00000641004 1759 ntBASIC5.5□□□□□ -1.53
TMEM88BA6NKF7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms