Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC116312.1-201ENST00000606841 314 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC019193.3-201ENST00000609144 554 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC131238.1-201ENST00000617135 328 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AL669831.3-213ENST00000636676 183 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 TLK1P1-201ENST00000456760 2440 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC106871.1-201ENST00000568324 3102 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 MIR200C-201ENST00000384980 68 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 MIR483-201ENST00000385070 76 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 SNORA48.4-201ENST00000391089 134 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 RPL21P90-201ENST00000415692 466 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 RPL7P2-201ENST00000427639 268 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 MRPS31P2-201ENST00000451581 518 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 FGF7P3-201ENST00000454645 303 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 RN7SL98P-201ENST00000462271 300 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC010285.1-201ENST00000470580 392 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC117503.1-201ENST00000472241 394 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AL049874.1-201ENST00000489560 388 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 RNU6-307P-201ENST00000516743 106 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC009902.1-201ENST00000519351 183 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AP000827.1-201ENST00000527814 258 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 SNRPGP16-201ENST00000533275 226 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AP002826.1-201ENST00000608835 315 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 RMST_9.1-201ENST00000619945 193 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 KPNA2P1-201ENST00000458289 1591 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 AC010266.2-201ENST00000564741 3255 ntBASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM88BA6NKF7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 UBE2L2-201ENST00000254302 429 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 SNORA63.1-201ENST00000362493 131 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 RNU6-266P-201ENST00000364225 107 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 SNORA63C-201ENST00000364578 129 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 SNORA70.9-201ENST00000384370 135 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 TMSB10P2-201ENST00000416049 131 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 UBE2V1P4-201ENST00000425374 344 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 RPS17P8-201ENST00000434525 335 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AC007389.2-201ENST00000434630 306 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AL691482.1-201ENST00000453255 87 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 RPL23AP31-201ENST00000456160 467 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AL132838.2-201ENST00000492041 314 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 RN7SKP67-201ENST00000515905 235 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 MIR4286-201ENST00000580651 93 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AC069200.1-201ENST00000609511 323 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 uc_338.22-201ENST00000622722 187 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AL512643.1-201ENST00000635735 524 ntBASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM88BA6NKF7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 AL049641.1-201ENST00000441055 1948 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 Y_RNA.28-201ENST00000362554 111 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 Y_RNA.112-201ENST00000363250 102 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 Y_RNA.216-201ENST00000364205 93 ntBASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TMEM88BA6NKF7 SNORA75B-201ENST00000384053 137 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms