Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Gm28033-201ENSMUST00000184224 96 ntBASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uspl1Q3ULM6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Gm15372-201ENSMUST00000120729 834 ntBASIC21■□□□□ 0.95
Uspl1Q3ULM6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Rprl3-201ENSMUST00000157400 290 ntBASIC21■□□□□ 0.95
Uspl1Q3ULM6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Uspl1Q3ULM6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Gm44454-201ENSMUST00000198541 138 ntBASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Gm18669-201ENSMUST00000216049 778 ntBASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Gm10819-201ENSMUST00000099988 561 ntBASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uspl1Q3ULM6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.98■□□□□ 0.95
Uspl1Q3ULM6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uspl1Q3ULM6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms