Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb1S4R1E0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb1S4R1E0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb1S4R1E0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb1S4R1E0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb1S4R1E0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.87■□□□□ 0.93
H2afb1S4R1E0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb1S4R1E0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb1S4R1E0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb1S4R1E0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb1S4R1E0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.86■□□□□ 0.93
H2afb1S4R1E0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
H2afb1S4R1E0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
H2afb1S4R1E0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
H2afb1S4R1E0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb1S4R1E0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.85■□□□□ 0.93
H2afb1S4R1E0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb1S4R1E0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb1S4R1E0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb1S4R1E0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb1S4R1E0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb1S4R1E0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
H2afb1S4R1E0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
H2afb1S4R1E0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1S4R1E0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
H2afb1S4R1E0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb1S4R1E0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb1S4R1E0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb1S4R1E0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb1S4R1E0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.8■□□□□ 0.92
H2afb1S4R1E0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb1S4R1E0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb1S4R1E0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb1S4R1E0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb1S4R1E0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb1S4R1E0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb1S4R1E0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb1S4R1E0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb1S4R1E0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.78■□□□□ 0.92
H2afb1S4R1E0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb1S4R1E0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afb1S4R1E0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afb1S4R1E0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afb1S4R1E0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
H2afb1S4R1E0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb1S4R1E0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.76■□□□□ 0.91
H2afb1S4R1E0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb1S4R1E0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb1S4R1E0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.75■□□□□ 0.91
H2afb1S4R1E0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.75■□□□□ 0.91
H2afb1S4R1E0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb1S4R1E0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
H2afb1S4R1E0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb1S4R1E0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb1S4R1E0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb1S4R1E0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb1S4R1E0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb1S4R1E0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb1S4R1E0 Particl-201ENSMUST00000205370 1560 ntBASIC20.73■□□□□ 0.91
H2afb1S4R1E0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb1S4R1E0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb1S4R1E0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
H2afb1S4R1E0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb1S4R1E0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb1S4R1E0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
H2afb1S4R1E0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb1S4R1E0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
H2afb1S4R1E0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.71■□□□□ 0.91
H2afb1S4R1E0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb1S4R1E0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
H2afb1S4R1E0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb1S4R1E0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.71■□□□□ 0.91
H2afb1S4R1E0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb1S4R1E0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb1S4R1E0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
H2afb1S4R1E0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb1S4R1E0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb1S4R1E0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
H2afb1S4R1E0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
H2afb1S4R1E0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1S4R1E0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1S4R1E0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1S4R1E0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1S4R1E0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.68■□□□□ 0.9
H2afb1S4R1E0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms