Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClpxQ9JHS4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClpxQ9JHS4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ClpxQ9JHS4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ClpxQ9JHS4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.03■□□□□ 0.96
ClpxQ9JHS4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClpxQ9JHS4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClpxQ9JHS4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClpxQ9JHS4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClpxQ9JHS4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClpxQ9JHS4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ClpxQ9JHS4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ClpxQ9JHS4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.01■□□□□ 0.95
ClpxQ9JHS4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClpxQ9JHS4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClpxQ9JHS4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ClpxQ9JHS4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21■□□□□ 0.95
ClpxQ9JHS4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21■□□□□ 0.95
ClpxQ9JHS4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ClpxQ9JHS4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ClpxQ9JHS4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ClpxQ9JHS4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ClpxQ9JHS4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.98■□□□□ 0.95
ClpxQ9JHS4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ClpxQ9JHS4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.96■□□□□ 0.95
ClpxQ9JHS4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClpxQ9JHS4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClpxQ9JHS4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClpxQ9JHS4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ClpxQ9JHS4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClpxQ9JHS4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClpxQ9JHS4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClpxQ9JHS4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ClpxQ9JHS4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ClpxQ9JHS4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ClpxQ9JHS4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ClpxQ9JHS4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClpxQ9JHS4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClpxQ9JHS4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ClpxQ9JHS4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClpxQ9JHS4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClpxQ9JHS4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
ClpxQ9JHS4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClpxQ9JHS4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ClpxQ9JHS4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ClpxQ9JHS4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ClpxQ9JHS4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ClpxQ9JHS4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ClpxQ9JHS4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ClpxQ9JHS4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.91■□□□□ 0.94
ClpxQ9JHS4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.91■□□□□ 0.94
ClpxQ9JHS4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClpxQ9JHS4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClpxQ9JHS4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ClpxQ9JHS4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClpxQ9JHS4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClpxQ9JHS4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ClpxQ9JHS4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.89■□□□□ 0.93
ClpxQ9JHS4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.88■□□□□ 0.93
ClpxQ9JHS4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClpxQ9JHS4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClpxQ9JHS4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClpxQ9JHS4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.88■□□□□ 0.93
ClpxQ9JHS4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClpxQ9JHS4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClpxQ9JHS4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClpxQ9JHS4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ClpxQ9JHS4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ClpxQ9JHS4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClpxQ9JHS4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ClpxQ9JHS4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClpxQ9JHS4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClpxQ9JHS4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClpxQ9JHS4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ClpxQ9JHS4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.86■□□□□ 0.93
ClpxQ9JHS4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClpxQ9JHS4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ClpxQ9JHS4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClpxQ9JHS4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClpxQ9JHS4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClpxQ9JHS4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClpxQ9JHS4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClpxQ9JHS4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClpxQ9JHS4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClpxQ9JHS4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClpxQ9JHS4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ClpxQ9JHS4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ClpxQ9JHS4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ClpxQ9JHS4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ClpxQ9JHS4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ClpxQ9JHS4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClpxQ9JHS4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClpxQ9JHS4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ClpxQ9JHS4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClpxQ9JHS4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClpxQ9JHS4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClpxQ9JHS4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClpxQ9JHS4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ClpxQ9JHS4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClpxQ9JHS4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms