Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lime1Q9EQR5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.4■□□□□ 0.86
Lime1Q9EQR5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lime1Q9EQR5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lime1Q9EQR5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lime1Q9EQR5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lime1Q9EQR5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lime1Q9EQR5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lime1Q9EQR5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Lime1Q9EQR5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lime1Q9EQR5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lime1Q9EQR5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lime1Q9EQR5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lime1Q9EQR5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lime1Q9EQR5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lime1Q9EQR5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lime1Q9EQR5 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.35■□□□□ 0.85
Lime1Q9EQR5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lime1Q9EQR5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lime1Q9EQR5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lime1Q9EQR5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lime1Q9EQR5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lime1Q9EQR5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.33■□□□□ 0.85
Lime1Q9EQR5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lime1Q9EQR5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lime1Q9EQR5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Lime1Q9EQR5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lime1Q9EQR5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lime1Q9EQR5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lime1Q9EQR5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lime1Q9EQR5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lime1Q9EQR5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lime1Q9EQR5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Lime1Q9EQR5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lime1Q9EQR5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lime1Q9EQR5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lime1Q9EQR5 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.29■□□□□ 0.84
Lime1Q9EQR5 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.29■□□□□ 0.84
Lime1Q9EQR5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lime1Q9EQR5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lime1Q9EQR5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lime1Q9EQR5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lime1Q9EQR5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Lime1Q9EQR5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Lime1Q9EQR5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lime1Q9EQR5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.27■□□□□ 0.84
Lime1Q9EQR5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lime1Q9EQR5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lime1Q9EQR5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lime1Q9EQR5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lime1Q9EQR5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.24■□□□□ 0.83
Lime1Q9EQR5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lime1Q9EQR5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lime1Q9EQR5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lime1Q9EQR5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lime1Q9EQR5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lime1Q9EQR5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.23■□□□□ 0.83
Lime1Q9EQR5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lime1Q9EQR5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lime1Q9EQR5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lime1Q9EQR5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lime1Q9EQR5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lime1Q9EQR5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lime1Q9EQR5 Gm45855-201ENSMUST00000212546 880 ntBASIC20.21■□□□□ 0.83
Lime1Q9EQR5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.21■□□□□ 0.83
Lime1Q9EQR5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Lime1Q9EQR5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lime1Q9EQR5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lime1Q9EQR5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lime1Q9EQR5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.18■□□□□ 0.82
Lime1Q9EQR5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lime1Q9EQR5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Lime1Q9EQR5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lime1Q9EQR5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lime1Q9EQR5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lime1Q9EQR5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lime1Q9EQR5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lime1Q9EQR5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lime1Q9EQR5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lime1Q9EQR5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lime1Q9EQR5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lime1Q9EQR5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.14■□□□□ 0.81
Lime1Q9EQR5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.14■□□□□ 0.81
Lime1Q9EQR5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lime1Q9EQR5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lime1Q9EQR5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms