Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sft2d3Q9CSV6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.64■□□□□ 0.73
Sft2d3Q9CSV6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sft2d3Q9CSV6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sft2d3Q9CSV6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sft2d3Q9CSV6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sft2d3Q9CSV6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sft2d3Q9CSV6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sft2d3Q9CSV6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sft2d3Q9CSV6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sft2d3Q9CSV6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sft2d3Q9CSV6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sft2d3Q9CSV6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sft2d3Q9CSV6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sft2d3Q9CSV6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sft2d3Q9CSV6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sft2d3Q9CSV6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sft2d3Q9CSV6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sft2d3Q9CSV6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sft2d3Q9CSV6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sft2d3Q9CSV6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sft2d3Q9CSV6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sft2d3Q9CSV6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sft2d3Q9CSV6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sft2d3Q9CSV6 Particl-201ENSMUST00000205370 1560 ntBASIC19.58■□□□□ 0.73
Sft2d3Q9CSV6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sft2d3Q9CSV6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sft2d3Q9CSV6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.58■□□□□ 0.72
Sft2d3Q9CSV6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sft2d3Q9CSV6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.57■□□□□ 0.72
Sft2d3Q9CSV6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sft2d3Q9CSV6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sft2d3Q9CSV6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sft2d3Q9CSV6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sft2d3Q9CSV6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.56■□□□□ 0.72
Sft2d3Q9CSV6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sft2d3Q9CSV6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sft2d3Q9CSV6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sft2d3Q9CSV6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sft2d3Q9CSV6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sft2d3Q9CSV6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sft2d3Q9CSV6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sft2d3Q9CSV6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sft2d3Q9CSV6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sft2d3Q9CSV6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sft2d3Q9CSV6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sft2d3Q9CSV6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sft2d3Q9CSV6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sft2d3Q9CSV6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sft2d3Q9CSV6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.52■□□□□ 0.72
Sft2d3Q9CSV6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sft2d3Q9CSV6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sft2d3Q9CSV6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sft2d3Q9CSV6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sft2d3Q9CSV6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sft2d3Q9CSV6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.5■□□□□ 0.71
Sft2d3Q9CSV6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sft2d3Q9CSV6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sft2d3Q9CSV6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sft2d3Q9CSV6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sft2d3Q9CSV6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sft2d3Q9CSV6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sft2d3Q9CSV6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sft2d3Q9CSV6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sft2d3Q9CSV6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sft2d3Q9CSV6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sft2d3Q9CSV6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sft2d3Q9CSV6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.45■□□□□ 0.7
Sft2d3Q9CSV6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sft2d3Q9CSV6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sft2d3Q9CSV6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sft2d3Q9CSV6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sft2d3Q9CSV6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sft2d3Q9CSV6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sft2d3Q9CSV6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sft2d3Q9CSV6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d3Q9CSV6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.43■□□□□ 0.7
Sft2d3Q9CSV6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.43■□□□□ 0.7
Sft2d3Q9CSV6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d3Q9CSV6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d3Q9CSV6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d3Q9CSV6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sft2d3Q9CSV6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sft2d3Q9CSV6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sft2d3Q9CSV6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sft2d3Q9CSV6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sft2d3Q9CSV6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.41■□□□□ 0.7
Sft2d3Q9CSV6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sft2d3Q9CSV6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.4■□□□□ 0.7
Sft2d3Q9CSV6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Sft2d3Q9CSV6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sft2d3Q9CSV6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.4■□□□□ 0.7
Sft2d3Q9CSV6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms