Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkiras2Q9CR56 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkiras2Q9CR56 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nkiras2Q9CR56 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkiras2Q9CR56 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkiras2Q9CR56 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Nkiras2Q9CR56 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkiras2Q9CR56 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nkiras2Q9CR56 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkiras2Q9CR56 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkiras2Q9CR56 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkiras2Q9CR56 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkiras2Q9CR56 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkiras2Q9CR56 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Nkiras2Q9CR56 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Nkiras2Q9CR56 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nkiras2Q9CR56 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nkiras2Q9CR56 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkiras2Q9CR56 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkiras2Q9CR56 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkiras2Q9CR56 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkiras2Q9CR56 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkiras2Q9CR56 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.64■□□□□ 0.89
Nkiras2Q9CR56 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkiras2Q9CR56 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.64■□□□□ 0.89
Nkiras2Q9CR56 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nkiras2Q9CR56 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkiras2Q9CR56 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkiras2Q9CR56 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkiras2Q9CR56 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkiras2Q9CR56 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkiras2Q9CR56 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkiras2Q9CR56 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.61■□□□□ 0.89
Nkiras2Q9CR56 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkiras2Q9CR56 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nkiras2Q9CR56 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkiras2Q9CR56 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nkiras2Q9CR56 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkiras2Q9CR56 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkiras2Q9CR56 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nkiras2Q9CR56 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkiras2Q9CR56 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkiras2Q9CR56 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkiras2Q9CR56 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkiras2Q9CR56 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.59■□□□□ 0.89
Nkiras2Q9CR56 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkiras2Q9CR56 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nkiras2Q9CR56 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Nkiras2Q9CR56 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkiras2Q9CR56 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkiras2Q9CR56 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkiras2Q9CR56 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Nkiras2Q9CR56 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkiras2Q9CR56 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkiras2Q9CR56 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkiras2Q9CR56 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.56■□□□□ 0.88
Nkiras2Q9CR56 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
Nkiras2Q9CR56 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nkiras2Q9CR56 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkiras2Q9CR56 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkiras2Q9CR56 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nkiras2Q9CR56 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkiras2Q9CR56 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkiras2Q9CR56 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkiras2Q9CR56 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkiras2Q9CR56 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.53■□□□□ 0.88
Nkiras2Q9CR56 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Nkiras2Q9CR56 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkiras2Q9CR56 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkiras2Q9CR56 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkiras2Q9CR56 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkiras2Q9CR56 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkiras2Q9CR56 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.52■□□□□ 0.88
Nkiras2Q9CR56 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.52■□□□□ 0.88
Nkiras2Q9CR56 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nkiras2Q9CR56 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.51■□□□□ 0.87
Nkiras2Q9CR56 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkiras2Q9CR56 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkiras2Q9CR56 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkiras2Q9CR56 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Nkain2-201ENSMUST00000092602 558 ntBASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkiras2Q9CR56 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.49■□□□□ 0.87
Nkiras2Q9CR56 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkiras2Q9CR56 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkiras2Q9CR56 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkiras2Q9CR56 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms