Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Pcdhga4Q91XY4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga4Q91XY4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga4Q91XY4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga4Q91XY4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.62■■□□□ 1.21
Pcdhga4Q91XY4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pcdhga4Q91XY4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhga4Q91XY4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcdhga4Q91XY4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Pcdhga4Q91XY4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga4Q91XY4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga4Q91XY4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga4Q91XY4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga4Q91XY4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga4Q91XY4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Pcdhga4Q91XY4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.59■■□□□ 1.21
Pcdhga4Q91XY4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdhga4Q91XY4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhga4Q91XY4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhga4Q91XY4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga4Q91XY4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga4Q91XY4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga4Q91XY4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga4Q91XY4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhga4Q91XY4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga4Q91XY4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga4Q91XY4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga4Q91XY4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga4Q91XY4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga4Q91XY4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga4Q91XY4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga4Q91XY4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Pcdhga4Q91XY4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga4Q91XY4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhga4Q91XY4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga4Q91XY4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga4Q91XY4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga4Q91XY4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhga4Q91XY4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.51■■□□□ 1.19
Pcdhga4Q91XY4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhga4Q91XY4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhga4Q91XY4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga4Q91XY4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.5■■□□□ 1.19
Pcdhga4Q91XY4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga4Q91XY4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga4Q91XY4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.49■■□□□ 1.19
Pcdhga4Q91XY4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhga4Q91XY4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga4Q91XY4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga4Q91XY4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga4Q91XY4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Pcdhga4Q91XY4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.47■■□□□ 1.19
Pcdhga4Q91XY4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga4Q91XY4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga4Q91XY4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga4Q91XY4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga4Q91XY4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga4Q91XY4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.45■■□□□ 1.18
Pcdhga4Q91XY4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga4Q91XY4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhga4Q91XY4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhga4Q91XY4 Gm37136-201ENSMUST00000194368 194 ntBASIC22.44■■□□□ 1.18
Pcdhga4Q91XY4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.44■■□□□ 1.18
Pcdhga4Q91XY4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhga4Q91XY4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga4Q91XY4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga4Q91XY4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga4Q91XY4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga4Q91XY4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga4Q91XY4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga4Q91XY4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga4Q91XY4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga4Q91XY4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga4Q91XY4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga4Q91XY4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhga4Q91XY4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhga4Q91XY4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhga4Q91XY4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhga4Q91XY4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.39■■□□□ 1.17
Pcdhga4Q91XY4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhga4Q91XY4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhga4Q91XY4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhga4Q91XY4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Pcdhga4Q91XY4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhga4Q91XY4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhga4Q91XY4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Pcdhga4Q91XY4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga4Q91XY4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga4Q91XY4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhga4Q91XY4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga4Q91XY4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga4Q91XY4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Pcdhga4Q91XY4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhga4Q91XY4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga4Q91XY4 Gm4799-201ENSMUST00000095396 657 ntBASIC22.36■■□□□ 1.17
Pcdhga4Q91XY4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga4Q91XY4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga4Q91XY4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga4Q91XY4 Gm6311-201ENSMUST00000073790 878 ntBASIC22.35■■□□□ 1.17
Pcdhga4Q91XY4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms