Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.94■□□□□ 0.62
Rab40cQ8VHQ4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Rab40cQ8VHQ4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40cQ8VHQ4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40cQ8VHQ4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40cQ8VHQ4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40cQ8VHQ4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40cQ8VHQ4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rab40cQ8VHQ4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40cQ8VHQ4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40cQ8VHQ4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Rab40cQ8VHQ4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40cQ8VHQ4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40cQ8VHQ4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40cQ8VHQ4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rab40cQ8VHQ4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40cQ8VHQ4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40cQ8VHQ4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rab40cQ8VHQ4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40cQ8VHQ4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40cQ8VHQ4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab40cQ8VHQ4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab40cQ8VHQ4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40cQ8VHQ4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40cQ8VHQ4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40cQ8VHQ4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40cQ8VHQ4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.87■□□□□ 0.61
Rab40cQ8VHQ4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40cQ8VHQ4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40cQ8VHQ4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40cQ8VHQ4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40cQ8VHQ4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40cQ8VHQ4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40cQ8VHQ4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40cQ8VHQ4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40cQ8VHQ4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40cQ8VHQ4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40cQ8VHQ4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40cQ8VHQ4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab40cQ8VHQ4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.84■□□□□ 0.61
Rab40cQ8VHQ4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab40cQ8VHQ4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab40cQ8VHQ4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rab40cQ8VHQ4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rab40cQ8VHQ4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rab40cQ8VHQ4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab40cQ8VHQ4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.83■□□□□ 0.6
Rab40cQ8VHQ4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rab40cQ8VHQ4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40cQ8VHQ4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40cQ8VHQ4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40cQ8VHQ4 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.81■□□□□ 0.6
Rab40cQ8VHQ4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40cQ8VHQ4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rab40cQ8VHQ4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40cQ8VHQ4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Rab40cQ8VHQ4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40cQ8VHQ4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40cQ8VHQ4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rab40cQ8VHQ4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40cQ8VHQ4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.8■□□□□ 0.6
Rab40cQ8VHQ4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40cQ8VHQ4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40cQ8VHQ4 Particl-201ENSMUST00000205370 1560 ntBASIC18.79■□□□□ 0.6
Rab40cQ8VHQ4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40cQ8VHQ4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Rab40cQ8VHQ4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40cQ8VHQ4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40cQ8VHQ4 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.78■□□□□ 0.6
Rab40cQ8VHQ4 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.78■□□□□ 0.6
Rab40cQ8VHQ4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40cQ8VHQ4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40cQ8VHQ4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rab40cQ8VHQ4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40cQ8VHQ4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40cQ8VHQ4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40cQ8VHQ4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40cQ8VHQ4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rab40cQ8VHQ4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40cQ8VHQ4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.75■□□□□ 0.59
Rab40cQ8VHQ4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40cQ8VHQ4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40cQ8VHQ4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40cQ8VHQ4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40cQ8VHQ4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.74■□□□□ 0.59
Rab40cQ8VHQ4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rab40cQ8VHQ4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40cQ8VHQ4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab40cQ8VHQ4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab40cQ8VHQ4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40cQ8VHQ4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40cQ8VHQ4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40cQ8VHQ4 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.7■□□□□ 0.58
Rab40cQ8VHQ4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40cQ8VHQ4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40cQ8VHQ4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms