Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf8Q8VC56 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf8Q8VC56 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.16■■□□□ 1.14
Rnf8Q8VC56 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.16■■□□□ 1.14
Rnf8Q8VC56 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf8Q8VC56 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.16■■□□□ 1.14
Rnf8Q8VC56 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf8Q8VC56 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf8Q8VC56 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf8Q8VC56 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf8Q8VC56 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf8Q8VC56 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf8Q8VC56 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf8Q8VC56 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf8Q8VC56 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf8Q8VC56 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf8Q8VC56 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf8Q8VC56 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rnf8Q8VC56 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf8Q8VC56 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf8Q8VC56 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf8Q8VC56 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf8Q8VC56 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf8Q8VC56 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf8Q8VC56 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf8Q8VC56 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.08■■□□□ 1.13
Rnf8Q8VC56 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.08■■□□□ 1.13
Rnf8Q8VC56 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf8Q8VC56 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf8Q8VC56 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf8Q8VC56 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf8Q8VC56 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.07■■□□□ 1.12
Rnf8Q8VC56 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Gm30023-201ENSMUST00000197970 889 ntBASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Rnf8Q8VC56 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf8Q8VC56 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf8Q8VC56 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf8Q8VC56 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf8Q8VC56 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rnf8Q8VC56 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf8Q8VC56 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf8Q8VC56 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf8Q8VC56 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf8Q8VC56 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf8Q8VC56 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.03■■□□□ 1.12
Rnf8Q8VC56 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.03■■□□□ 1.12
Rnf8Q8VC56 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf8Q8VC56 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf8Q8VC56 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf8Q8VC56 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf8Q8VC56 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf8Q8VC56 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf8Q8VC56 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Rnf8Q8VC56 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.02■■□□□ 1.11
Rnf8Q8VC56 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf8Q8VC56 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf8Q8VC56 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf8Q8VC56 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.01■■□□□ 1.11
Rnf8Q8VC56 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf8Q8VC56 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf8Q8VC56 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf8Q8VC56 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Rnf8Q8VC56 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf8Q8VC56 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
Rnf8Q8VC56 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
Rnf8Q8VC56 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf8Q8VC56 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Rnf8Q8VC56 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf8Q8VC56 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf8Q8VC56 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf8Q8VC56 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf8Q8VC56 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.98■■□□□ 1.11
Rnf8Q8VC56 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf8Q8VC56 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf8Q8VC56 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf8Q8VC56 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf8Q8VC56 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Rnf8Q8VC56 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.11
Rnf8Q8VC56 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Rnf8Q8VC56 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rnf8Q8VC56 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Rnf8Q8VC56 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf8Q8VC56 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.95■■□□□ 1.1
Rnf8Q8VC56 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf8Q8VC56 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf8Q8VC56 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf8Q8VC56 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf8Q8VC56 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf8Q8VC56 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.94■■□□□ 1.1
Rnf8Q8VC56 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf8Q8VC56 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf8Q8VC56 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf8Q8VC56 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms