Protein–RNA interactions for Protein: Q8R3G9

Tspan8, Tetraspanin-8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan8Q8R3G9 Gm4799-201ENSMUST00000095396 657 ntBASIC25.55■■□□□ 1.68
Tspan8Q8R3G9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tspan8Q8R3G9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tspan8Q8R3G9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Tspan8Q8R3G9 Gm45364-201ENSMUST00000210883 159 ntBASIC25.53■■□□□ 1.68
Tspan8Q8R3G9 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.53■■□□□ 1.68
Tspan8Q8R3G9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Tspan8Q8R3G9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Mir3960-201ENSMUST00000198213 73 ntBASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tspan8Q8R3G9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Tspan8Q8R3G9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Tspan8Q8R3G9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Tspan8Q8R3G9 Gm6311-201ENSMUST00000073790 878 ntBASIC25.51■■□□□ 1.67
Tspan8Q8R3G9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Tspan8Q8R3G9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Tspan8Q8R3G9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Tspan8Q8R3G9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.5■■□□□ 1.67
Tspan8Q8R3G9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Tspan8Q8R3G9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Tspan8Q8R3G9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Tspan8Q8R3G9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Tspan8Q8R3G9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Tspan8Q8R3G9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Tspan8Q8R3G9 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.44■■□□□ 1.66
Tspan8Q8R3G9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tspan8Q8R3G9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tspan8Q8R3G9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tspan8Q8R3G9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tspan8Q8R3G9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Tspan8Q8R3G9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.43■■□□□ 1.66
Tspan8Q8R3G9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Tspan8Q8R3G9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.42■■□□□ 1.66
Tspan8Q8R3G9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Tspan8Q8R3G9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Tspan8Q8R3G9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Tspan8Q8R3G9 Gm9812-201ENSMUST00000061934 968 ntBASIC25.41■■□□□ 1.66
Tspan8Q8R3G9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Tspan8Q8R3G9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tspan8Q8R3G9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Tspan8Q8R3G9 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.4■■□□□ 1.66
Tspan8Q8R3G9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Tspan8Q8R3G9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.38■■□□□ 1.65
Tspan8Q8R3G9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Tspan8Q8R3G9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.38■■□□□ 1.65
Tspan8Q8R3G9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.38■■□□□ 1.65
Tspan8Q8R3G9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
Tspan8Q8R3G9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Tspan8Q8R3G9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Tspan8Q8R3G9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Tspan8Q8R3G9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Tspan8Q8R3G9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Tspan8Q8R3G9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Tspan8Q8R3G9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.36■■□□□ 1.65
Tspan8Q8R3G9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.36■■□□□ 1.65
Tspan8Q8R3G9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Tspan8Q8R3G9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Tspan8Q8R3G9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Tspan8Q8R3G9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Tspan8Q8R3G9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Tspan8Q8R3G9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Tspan8Q8R3G9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Tspan8Q8R3G9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Mir6538-201ENSMUST00000183713 110 ntBASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Tspan8Q8R3G9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Tspan8Q8R3G9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Tspan8Q8R3G9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Tspan8Q8R3G9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Tspan8Q8R3G9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Tspan8Q8R3G9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Tspan8Q8R3G9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tspan8Q8R3G9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tspan8Q8R3G9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tspan8Q8R3G9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tspan8Q8R3G9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tspan8Q8R3G9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Tspan8Q8R3G9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tspan8Q8R3G9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Tspan8Q8R3G9 Scarna2-201ENSMUST00000157560 414 ntBASIC25.27■■□□□ 1.64
Tspan8Q8R3G9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Tspan8Q8R3G9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.26■■□□□ 1.63
Tspan8Q8R3G9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tspan8Q8R3G9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tspan8Q8R3G9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tspan8Q8R3G9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tspan8Q8R3G9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tspan8Q8R3G9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.25■■□□□ 1.63
Tspan8Q8R3G9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms