Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cystm1Q8K353 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cystm1Q8K353 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cystm1Q8K353 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.51□□□□□ -0.09
Cystm1Q8K353 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.51□□□□□ -0.09
Cystm1Q8K353 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cystm1Q8K353 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cystm1Q8K353 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cystm1Q8K353 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cystm1Q8K353 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cystm1Q8K353 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cystm1Q8K353 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cystm1Q8K353 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC14.49□□□□□ -0.09
Cystm1Q8K353 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cystm1Q8K353 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.49□□□□□ -0.09
Cystm1Q8K353 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cystm1Q8K353 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cystm1Q8K353 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cystm1Q8K353 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cystm1Q8K353 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Cystm1Q8K353 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cystm1Q8K353 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cystm1Q8K353 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cystm1Q8K353 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cystm1Q8K353 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cystm1Q8K353 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cystm1Q8K353 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cystm1Q8K353 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cystm1Q8K353 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cystm1Q8K353 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cystm1Q8K353 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cystm1Q8K353 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cystm1Q8K353 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cystm1Q8K353 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cystm1Q8K353 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Cystm1Q8K353 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cystm1Q8K353 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cystm1Q8K353 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cystm1Q8K353 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cystm1Q8K353 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Gm45855-201ENSMUST00000212546 880 ntBASIC14.43□□□□□ -0.1
Cystm1Q8K353 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.43□□□□□ -0.1
Cystm1Q8K353 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cystm1Q8K353 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cystm1Q8K353 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cystm1Q8K353 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cystm1Q8K353 Gm9397-201ENSMUST00000200125 605 ntBASIC14.42□□□□□ -0.1
Cystm1Q8K353 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cystm1Q8K353 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cystm1Q8K353 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cystm1Q8K353 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.41□□□□□ -0.1
Cystm1Q8K353 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cystm1Q8K353 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cystm1Q8K353 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC14.41□□□□□ -0.1
Cystm1Q8K353 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cystm1Q8K353 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cystm1Q8K353 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.4□□□□□ -0.1
Cystm1Q8K353 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cystm1Q8K353 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC14.39□□□□□ -0.11
Cystm1Q8K353 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cystm1Q8K353 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cystm1Q8K353 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cystm1Q8K353 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cystm1Q8K353 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cystm1Q8K353 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cystm1Q8K353 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cystm1Q8K353 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cystm1Q8K353 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cystm1Q8K353 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cystm1Q8K353 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cystm1Q8K353 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cystm1Q8K353 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cystm1Q8K353 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cystm1Q8K353 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cystm1Q8K353 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.37□□□□□ -0.11
Cystm1Q8K353 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cystm1Q8K353 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cystm1Q8K353 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.36□□□□□ -0.11
Cystm1Q8K353 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms