Protein–RNA interactions for Protein: Q8C570

Rae1, mRNA export factor, mousemouse

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rae1Q8C570 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Rae1Q8C570 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rae1Q8C570 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rae1Q8C570 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.31■■□□□ 1
Rae1Q8C570 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rae1Q8C570 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rae1Q8C570 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rae1Q8C570 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rae1Q8C570 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rae1Q8C570 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Rae1Q8C570 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rae1Q8C570 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rae1Q8C570 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rae1Q8C570 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rae1Q8C570 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rae1Q8C570 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rae1Q8C570 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rae1Q8C570 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rae1Q8C570 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rae1Q8C570 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rae1Q8C570 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rae1Q8C570 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.25■□□□□ 0.99
Rae1Q8C570 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rae1Q8C570 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rae1Q8C570 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rae1Q8C570 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rae1Q8C570 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rae1Q8C570 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rae1Q8C570 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rae1Q8C570 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rae1Q8C570 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.23■□□□□ 0.99
Rae1Q8C570 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rae1Q8C570 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.22■□□□□ 0.99
Rae1Q8C570 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rae1Q8C570 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rae1Q8C570 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rae1Q8C570 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Rae1Q8C570 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rae1Q8C570 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rae1Q8C570 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rae1Q8C570 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rae1Q8C570 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.19■□□□□ 0.98
Rae1Q8C570 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rae1Q8C570 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.18■□□□□ 0.98
Rae1Q8C570 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Rae1Q8C570 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Rae1Q8C570 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rae1Q8C570 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rae1Q8C570 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.17■□□□□ 0.98
Rae1Q8C570 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rae1Q8C570 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rae1Q8C570 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rae1Q8C570 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rae1Q8C570 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rae1Q8C570 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rae1Q8C570 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rae1Q8C570 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
Rae1Q8C570 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rae1Q8C570 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Rae1Q8C570 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rae1Q8C570 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rae1Q8C570 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rae1Q8C570 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rae1Q8C570 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rae1Q8C570 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rae1Q8C570 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Rae1Q8C570 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rae1Q8C570 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.12■□□□□ 0.97
Rae1Q8C570 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rae1Q8C570 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rae1Q8C570 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rae1Q8C570 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rae1Q8C570 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rae1Q8C570 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rae1Q8C570 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rae1Q8C570 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rae1Q8C570 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rae1Q8C570 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rae1Q8C570 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rae1Q8C570 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rae1Q8C570 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rae1Q8C570 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Rae1Q8C570 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rae1Q8C570 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rae1Q8C570 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rae1Q8C570 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rae1Q8C570 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rae1Q8C570 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.09■□□□□ 0.97
Rae1Q8C570 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rae1Q8C570 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rae1Q8C570 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rae1Q8C570 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rae1Q8C570 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rae1Q8C570 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rae1Q8C570 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rae1Q8C570 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rae1Q8C570 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rae1Q8C570 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rae1Q8C570 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rae1Q8C570 Nkain2-201ENSMUST00000092602 558 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms