Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smim4Q8C1Q6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smim4Q8C1Q6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Smim4Q8C1Q6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim4Q8C1Q6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Particl-201ENSMUST00000205370 1560 ntBASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim4Q8C1Q6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim4Q8C1Q6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smim4Q8C1Q6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smim4Q8C1Q6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smim4Q8C1Q6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smim4Q8C1Q6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smim4Q8C1Q6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smim4Q8C1Q6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim4Q8C1Q6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smim4Q8C1Q6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim4Q8C1Q6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim4Q8C1Q6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim4Q8C1Q6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smim4Q8C1Q6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smim4Q8C1Q6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smim4Q8C1Q6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smim4Q8C1Q6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim4Q8C1Q6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim4Q8C1Q6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smim4Q8C1Q6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim4Q8C1Q6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim4Q8C1Q6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim4Q8C1Q6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Smim4Q8C1Q6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smim4Q8C1Q6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smim4Q8C1Q6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.2■□□□□ 0.66
Smim4Q8C1Q6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smim4Q8C1Q6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim4Q8C1Q6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim4Q8C1Q6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms