Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.29■■□□□ 1.32
Cpsf7Q8BTV2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf7Q8BTV2 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.28■■□□□ 1.32
Cpsf7Q8BTV2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf7Q8BTV2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cpsf7Q8BTV2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpsf7Q8BTV2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpsf7Q8BTV2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpsf7Q8BTV2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.25■■□□□ 1.31
Cpsf7Q8BTV2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cpsf7Q8BTV2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.24■■□□□ 1.31
Cpsf7Q8BTV2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cpsf7Q8BTV2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.23■■□□□ 1.31
Cpsf7Q8BTV2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cpsf7Q8BTV2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cpsf7Q8BTV2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cpsf7Q8BTV2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cpsf7Q8BTV2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cpsf7Q8BTV2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.21■■□□□ 1.31
Cpsf7Q8BTV2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cpsf7Q8BTV2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Cpsf7Q8BTV2 Gm45855-201ENSMUST00000212546 880 ntBASIC23.2■■□□□ 1.3
Cpsf7Q8BTV2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf7Q8BTV2 Particl-201ENSMUST00000205370 1560 ntBASIC23.19■■□□□ 1.3
Cpsf7Q8BTV2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf7Q8BTV2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf7Q8BTV2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf7Q8BTV2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpsf7Q8BTV2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cpsf7Q8BTV2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cpsf7Q8BTV2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cpsf7Q8BTV2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cpsf7Q8BTV2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cpsf7Q8BTV2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cpsf7Q8BTV2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cpsf7Q8BTV2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cpsf7Q8BTV2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cpsf7Q8BTV2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cpsf7Q8BTV2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Cpsf7Q8BTV2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cpsf7Q8BTV2 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.14■■□□□ 1.29
Cpsf7Q8BTV2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.14■■□□□ 1.29
Cpsf7Q8BTV2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Cpsf7Q8BTV2 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.13■■□□□ 1.29
Cpsf7Q8BTV2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cpsf7Q8BTV2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cpsf7Q8BTV2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cpsf7Q8BTV2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cpsf7Q8BTV2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cpsf7Q8BTV2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cpsf7Q8BTV2 Gm9397-201ENSMUST00000200125 605 ntBASIC23.11■■□□□ 1.29
Cpsf7Q8BTV2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cpsf7Q8BTV2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cpsf7Q8BTV2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cpsf7Q8BTV2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cpsf7Q8BTV2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cpsf7Q8BTV2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cpsf7Q8BTV2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Cpsf7Q8BTV2 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.09■■□□□ 1.29
Cpsf7Q8BTV2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cpsf7Q8BTV2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.09■■□□□ 1.29
Cpsf7Q8BTV2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cpsf7Q8BTV2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.07■■□□□ 1.28
Cpsf7Q8BTV2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.07■■□□□ 1.28
Cpsf7Q8BTV2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Cpsf7Q8BTV2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cpsf7Q8BTV2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cpsf7Q8BTV2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Cpsf7Q8BTV2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cpsf7Q8BTV2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cpsf7Q8BTV2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cpsf7Q8BTV2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.06■■□□□ 1.28
Cpsf7Q8BTV2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cpsf7Q8BTV2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.05■■□□□ 1.28
Cpsf7Q8BTV2 Gm30023-201ENSMUST00000197970 889 ntBASIC23.05■■□□□ 1.28
Cpsf7Q8BTV2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cpsf7Q8BTV2 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.04■■□□□ 1.28
Cpsf7Q8BTV2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cpsf7Q8BTV2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Cpsf7Q8BTV2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cpsf7Q8BTV2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.03■■□□□ 1.28
Cpsf7Q8BTV2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cpsf7Q8BTV2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cpsf7Q8BTV2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms