Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf38Q8BI21 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Rnf38Q8BI21 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf38Q8BI21 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.45■■□□□ 1.18
Rnf38Q8BI21 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf38Q8BI21 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf38Q8BI21 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.44■■□□□ 1.18
Rnf38Q8BI21 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.43■■□□□ 1.18
Rnf38Q8BI21 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.43■■□□□ 1.18
Rnf38Q8BI21 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf38Q8BI21 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf38Q8BI21 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf38Q8BI21 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf38Q8BI21 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf38Q8BI21 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf38Q8BI21 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf38Q8BI21 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf38Q8BI21 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf38Q8BI21 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf38Q8BI21 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf38Q8BI21 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.38■■□□□ 1.17
Rnf38Q8BI21 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Rnf38Q8BI21 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf38Q8BI21 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf38Q8BI21 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf38Q8BI21 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.37■■□□□ 1.17
Rnf38Q8BI21 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.37■■□□□ 1.17
Rnf38Q8BI21 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf38Q8BI21 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
Rnf38Q8BI21 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf38Q8BI21 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rnf38Q8BI21 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf38Q8BI21 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rnf38Q8BI21 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf38Q8BI21 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf38Q8BI21 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf38Q8BI21 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf38Q8BI21 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf38Q8BI21 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf38Q8BI21 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf38Q8BI21 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf38Q8BI21 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.32■■□□□ 1.16
Rnf38Q8BI21 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.31■■□□□ 1.16
Rnf38Q8BI21 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf38Q8BI21 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf38Q8BI21 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf38Q8BI21 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf38Q8BI21 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf38Q8BI21 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.29■■□□□ 1.16
Rnf38Q8BI21 Particl-201ENSMUST00000205370 1560 ntBASIC22.29■■□□□ 1.16
Rnf38Q8BI21 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf38Q8BI21 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf38Q8BI21 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf38Q8BI21 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf38Q8BI21 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf38Q8BI21 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf38Q8BI21 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf38Q8BI21 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.27■■□□□ 1.16
Rnf38Q8BI21 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.27■■□□□ 1.16
Rnf38Q8BI21 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf38Q8BI21 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Rnf38Q8BI21 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf38Q8BI21 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf38Q8BI21 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf38Q8BI21 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf38Q8BI21 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf38Q8BI21 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf38Q8BI21 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rnf38Q8BI21 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf38Q8BI21 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf38Q8BI21 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.24■■□□□ 1.15
Rnf38Q8BI21 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Rnf38Q8BI21 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf38Q8BI21 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf38Q8BI21 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Rnf38Q8BI21 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf38Q8BI21 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf38Q8BI21 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf38Q8BI21 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf38Q8BI21 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf38Q8BI21 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf38Q8BI21 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rnf38Q8BI21 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rnf38Q8BI21 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf38Q8BI21 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf38Q8BI21 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Rnf38Q8BI21 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf38Q8BI21 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Rnf38Q8BI21 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf38Q8BI21 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf38Q8BI21 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf38Q8BI21 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf38Q8BI21 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf38Q8BI21 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Rnf38Q8BI21 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf38Q8BI21 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf38Q8BI21 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.18■■□□□ 1.14
Rnf38Q8BI21 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf38Q8BI21 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Rnf38Q8BI21 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms