Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Negr1Q80Z24 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.46■□□□□ 0.87
Negr1Q80Z24 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Negr1Q80Z24 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Negr1Q80Z24 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Negr1Q80Z24 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.45■□□□□ 0.86
Negr1Q80Z24 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Negr1Q80Z24 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Negr1Q80Z24 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Negr1Q80Z24 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Negr1Q80Z24 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Negr1Q80Z24 Particl-201ENSMUST00000205370 1560 ntBASIC20.44■□□□□ 0.86
Negr1Q80Z24 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Negr1Q80Z24 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Negr1Q80Z24 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Negr1Q80Z24 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Negr1Q80Z24 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Negr1Q80Z24 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.42■□□□□ 0.86
Negr1Q80Z24 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Negr1Q80Z24 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Negr1Q80Z24 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Negr1Q80Z24 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Negr1Q80Z24 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Negr1Q80Z24 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.41■□□□□ 0.86
Negr1Q80Z24 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Negr1Q80Z24 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Negr1Q80Z24 Gm8503-201ENSMUST00000118131 455 ntBASIC20.4■□□□□ 0.86
Negr1Q80Z24 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Negr1Q80Z24 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Negr1Q80Z24 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Negr1Q80Z24 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Negr1Q80Z24 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Negr1Q80Z24 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Negr1Q80Z24 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Negr1Q80Z24 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Negr1Q80Z24 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Negr1Q80Z24 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Negr1Q80Z24 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Negr1Q80Z24 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Negr1Q80Z24 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Negr1Q80Z24 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Negr1Q80Z24 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Negr1Q80Z24 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Negr1Q80Z24 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Negr1Q80Z24 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.34■□□□□ 0.85
Negr1Q80Z24 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Negr1Q80Z24 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Negr1Q80Z24 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Negr1Q80Z24 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Negr1Q80Z24 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Negr1Q80Z24 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Negr1Q80Z24 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.31■□□□□ 0.84
Negr1Q80Z24 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Negr1Q80Z24 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Negr1Q80Z24 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Negr1Q80Z24 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Negr1Q80Z24 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Negr1Q80Z24 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Negr1Q80Z24 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Negr1Q80Z24 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Negr1Q80Z24 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Negr1Q80Z24 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Negr1Q80Z24 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Negr1Q80Z24 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Negr1Q80Z24 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Negr1Q80Z24 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Negr1Q80Z24 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Negr1Q80Z24 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.28■□□□□ 0.84
Negr1Q80Z24 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Negr1Q80Z24 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Negr1Q80Z24 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Negr1Q80Z24 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Negr1Q80Z24 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Negr1Q80Z24 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Negr1Q80Z24 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Negr1Q80Z24 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Negr1Q80Z24 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Negr1Q80Z24 Gm37136-201ENSMUST00000194368 194 ntBASIC20.25■□□□□ 0.83
Negr1Q80Z24 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Negr1Q80Z24 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Negr1Q80Z24 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Negr1Q80Z24 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Negr1Q80Z24 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Negr1Q80Z24 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Negr1Q80Z24 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Negr1Q80Z24 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Negr1Q80Z24 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Negr1Q80Z24 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Negr1Q80Z24 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.22■□□□□ 0.83
Negr1Q80Z24 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Negr1Q80Z24 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Negr1Q80Z24 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Negr1Q80Z24 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Negr1Q80Z24 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Negr1Q80Z24 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.21■□□□□ 0.83
Negr1Q80Z24 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Negr1Q80Z24 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Negr1Q80Z24 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Negr1Q80Z24 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Negr1Q80Z24 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms